Shewanella japonica: SJ2017_2774
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Entry
SJ2017_2774 CDS
T04959
Name
(GenBank) Fatty acid oxidation complex subunit alpha
KO
K01782
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
]
Organism
sja
Shewanella japonica
Pathway
sja00071
Fatty acid degradation
sja00280
Valine, leucine and isoleucine degradation
sja00310
Lysine degradation
sja00362
Benzoate degradation
sja00380
Tryptophan metabolism
sja00410
beta-Alanine metabolism
sja00640
Propanoate metabolism
sja00650
Butanoate metabolism
sja00907
Pinene, camphor and geraniol degradation
sja00930
Caprolactam degradation
sja01100
Metabolic pathways
sja01110
Biosynthesis of secondary metabolites
sja01120
Microbial metabolism in diverse environments
sja01200
Carbon metabolism
sja01212
Fatty acid metabolism
Module
sja_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
sja00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
SJ2017_2774
00650 Butanoate metabolism
SJ2017_2774
09103 Lipid metabolism
00071 Fatty acid degradation
SJ2017_2774
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
SJ2017_2774
00310 Lysine degradation
SJ2017_2774
00380 Tryptophan metabolism
SJ2017_2774
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
SJ2017_2774
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
SJ2017_2774
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
SJ2017_2774
00930 Caprolactam degradation
SJ2017_2774
Enzymes [BR:
sja01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
SJ2017_2774
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
SJ2017_2774
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
SJ2017_2774
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
LSDAT_euk
LEM
Motif
Other DBs
NCBI-ProteinID:
ARD23055
UniProt:
A0ABN4YLD8
LinkDB
All DBs
Position
complement(3283249..3285369)
Genome browser
AA seq
706 aa
AA seq
DB search
MEKTFNLSRREDGIAVLTMDVPGETMNTLKAEFGPEISEILAEIKHDASVKGLVVISGKA
DSFVAGADISMLDACTSVAAAKELSQQGHVVFNELENLSIPVVAAINGACLGGGLELALA
CHLRVCTDDKKTIMGVPEVQLGLLPGGGGTQRLPRKVGITTALDMMLTGKQIRPKQALKM
ALVDDVVPEPILLETAISMAKKGKSAAKVAKKSALNKVLESTSATRDIIFDQAAKQVLKK
TQGNYPAPAKIIDCVKQGMNKGMIKGLEVEASHFAELVMSSESEALRSIFFATTEMKKET
GADGAEPRKVNKALVIGGGLMGGGIASVTTTKAKIPARVKDINEKGLSNALAYAYKLLAK
GVKRRHMTPAVRDNLMALMTTTTEYKGVKDADIVVEAVFEDLALKHQMVKDVERECHENT
IFASNTSSLPIGQIAEAASRPENVIGLHYFSPVEKMPLVEVIAHKTTSPETIATTVAFAR
KQGKTPIVVQDGAGFYVNRILALYMNEAAQVLLSGEKVESLDKALVKFGFPVGPITLLDE
VGIDVGAKIAPILTQELGERFKAPDAFDKLLADDRKGRKNGKGFYQYGNKKSKAKLVDES
VYQVLGVNNQSTGSGSDIAMRCVVQMLNEAVRCLDEGIIASARDGDIGAIFGIGFPPFLG
GPFKYMDSMGIANLVSKLRQYQQQHGDRFEPCERLVNMAESGSTFY
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
atggaaaagacatttaatttatctcgccgcgaagacggaattgcagtgttaacaatggat
gttcctggtgaaaccatgaacaccttaaaagcagaatttggtcctgaaatcagcgaaata
ctagctgaaatcaaacatgatgccagtgtgaaagggcttgtggttatctcgggtaaagct
gactcatttgttgctggtgcagatatcagcatgttagatgcatgcaccagcgttgcagct
gctaaagagttgtctcagcaagggcatgttgtattcaatgagcttgaaaatttatcgatt
cctgtcgtagcagctatcaatggtgcatgtctaggtggcggtttagagttagcgttagcg
tgtcatttacgtgtttgtactgatgacaaaaaaaccatcatgggtgtgccggaagtgcaa
cttggtttactgcctggtggtgggggaacacaacgtttaccgagaaaagtcggtattacc
actgcacttgatatgatgctaacaggcaaacaaattcgccctaaacaagcgcttaaaatg
gcactggttgatgacgtagtacctgagcctattttattagaaactgctatttcaatggct
aaaaaaggtaagtccgcagcaaaagtcgctaagaaaagtgcattaaataaggtgcttgaa
tcaacaagcgcaactcgcgatatcatttttgatcaagctgcaaaacaagtccttaaaaag
acccaaggtaattacccagcgccagccaaaattattgactgtgttaaacaaggcatgaac
aaaggcatgattaaagggcttgaagttgaagccagtcattttgccgaattagtcatgtca
tcagagtctgaagcacttcgcagcattttctttgctacgacagaaatgaaaaaagaaaca
ggtgccgatggagctgagccgcgtaaggttaataaagccttagttatcggtggtggtttg
atgggaggcggtattgcttctgtgacaacgactaaagctaaaatccctgcacgtgtgaaa
gacattaatgaaaaagggttaagtaacgcgttagcttatgcttataaattattggctaaa
ggcgttaagcgtcgtcatatgactccagctgttagagataatttaatggcattgatgacg
acaacgactgaatataaaggtgttaaggatgccgatattgtcgttgaagccgtttttgaa
gatttagctcttaagcaccaaatggtaaaagatgttgagcgtgaatgtcatgaaaatact
attttcgcttcaaatacgtcttcgttaccgattggacagattgcagaggcagcttcccgt
cctgaaaacgtgattggtcttcattatttttcacctgttgaaaaaatgccgctggtcgag
gtgattgcccataaaacgacatcaccagagacgattgcaactacggttgcatttgcgcgt
aagcaaggcaaaaccccgattgttgttcaagacggtgcgggtttctatgtgaaccgtatt
cttgctttatacatgaatgaagccgctcaagttttattgtctggcgaaaaagtagaaagt
ttagataaagccctcgtaaaatttggtttcccagtgggacccattacattattagatgaa
gtcggaatagatgttggagctaaaattgcgccgatcttaacccaagagttaggtgaaagg
ttcaaagccccagatgcgtttgacaagttgttagcagacgatcgaaaaggtcgtaaaaat
ggcaagggcttttatcaatatggtaataagaagtctaaagctaaattggttgatgagtcc
gtttatcaggtacttggtgtcaataatcaatctactggttcgggtagtgatattgccatg
cgctgcgtggtccaaatgctcaatgaggccgttcgctgtttagatgagggtattattgcc
agtgctcgagatggtgatattggcgcaatcttcgggattggattcccacctttcttaggc
ggtccatttaaatacatggacagtatgggaatcgctaacttagtgtcaaaattacgtcag
tatcaacaacaacatggcgatagatttgaaccttgtgaaaggttggtcaacatggctgag
tcaggcagcactttctattag
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