Shewanella japonica: SJ2017_2855
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Entry
SJ2017_2855 CDS
T04959
Name
(GenBank) Na+/H+ antiporter NhaC
KO
K18218
tetracycline resistance efflux pump
Organism
sja
Shewanella japonica
Brite
KEGG Orthology (KO) [BR:
sja00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sja02000
]
SJ2017_2855
01504 Antimicrobial resistance genes [BR:
sja01504
]
SJ2017_2855
Transporters [BR:
sja02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
SJ2017_2855
Antimicrobial resistance genes [BR:
sja01504
]
Gene variants
Tetracycline resistance genes
Transporters
SJ2017_2855
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Na_H_antiporter
CitMHS
Motif
Other DBs
NCBI-ProteinID:
ARD23134
LinkDB
All DBs
Position
complement(3380055..3381611)
Genome browser
AA seq
518 aa
AA seq
DB search
MMITSYADSALSLLPPVVAIVLAVVTRKVLLSLGLGIIAGVILLTDFSFTGAASHLVSTV
TSLVWDDGALNAWNLQIIGFLVVLGVITALITVSGSARAFADWAHQRIRNKRDAKLMTMF
LGCVVFIDDYFNSIVVGSIARPITDRYHISRAKLAYLLDSTAAPVCVISPVSSWGAYIIA
LIGGILTAHGFADTGHLSVFLQMVPMNFYAIFALLLLLCVAIFGLDIGPMRQHERNAQKG
ELFDESKGLPPGATADLPEADTGKIMGLFLPIFVLVAATIYFMVSTGADALAGEGLPFSV
LGAFENTEVSESLFYGSLVGLVVTIALTMQQKISTSMMFTGIKVGAKSMLPAIYILLFAW
TIASVIGELETGKYMASLATGNIPFALLPAVLFLLAGLTAFSTGTSWGTFGIMLPIAADM
AMGSDSTMMLPMLAAVLSGAVFGDHCSPISDTTILSSTGASCHHLDHVMTQLPYAIIVAV
ISIVGYTVLGFSGSVAMGFITCSVLFVLAILGLKIATK
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
atgatgataacaagttatgccgattcggcactctctcttttgcctcctgttgtggcaatt
gtattagcagtagttacacgcaaagtacttctttcattaggtttaggtattattgctggc
gtgatattgctgactgatttctcttttactggagctgcaagccacttagtgagtactgtc
accagtttagtgtgggatgacggcgcactcaatgcctggaatttacaaattattggcttc
ttggttgtattgggggtgatcaccgctttaattaccgtgagtggttcagcacgtgcgttt
gctgattgggcacaccaacgtattcgcaataaacgtgacgccaaactcatgaccatgttc
ttaggttgtgtggtatttatcgacgattacttcaacagtatcgtggttggctcaatcgca
cgtcctattactgatcgctaccatatttcacgtgcaaaactggcctacttgttagattca
accgctgcgccagtttgtgttatctctccagtctcaagctggggcgcatacattattgcc
ctaattggcggtatcttaacggcacatggttttgctgataccggccatttaagcgtgttt
ttacaaatggtgccgatgaacttttatgccatttttgcgctattacttttattgtgtgtt
gctatctttggtttagacattggcccaatgcgccaacatgagcgtaatgcgcaaaaaggc
gaactctttgacgaaagcaaagggttacctccaggcgccaccgctgatttaccagaagct
gatacaggtaaaatcatggggttattcctgccgatttttgtgcttgtggcggcaactatt
tactttatggtttcaaccggtgctgatgcgctggcgggtgaaggtttaccatttagtgtt
ttaggtgcatttgaaaacactgaagtcagcgaatcattattttacggctcattagtgggt
ctagtggtgacgattgcattaaccatgcagcaaaaaattagcaccagcatgatgtttact
ggaatcaaagttggcgctaagtcaatgttgccagctatttatatcttgttatttgcttgg
acaattgcgtcagtgattggcgagcttgaaacgggtaaatatatggcgagcttggcaacg
ggtaatattccatttgcattgctgcctgcagtgctatttttattagctggtttaaccgca
ttttcaaccggcactagctggggcacatttggtattatgttaccaatcgctgccgatatg
gcgatgggcagtgatagcactatgatgttaccaatgcttgccgcggtgctttctggtgcg
gtatttggagaccattgttcaccgatttctgataccactatcttgtcttcgacaggagcg
agctgtcaccatcttgaccacgttatgacacaattgccttacgcgataatcgtagcggtt
atcagtattgtgggttataccgtgcttggtttctctggttctgttgcgatgggctttatt
acgtgttctgtattgttcgtattagcaatcttaggactaaaaatagccactaagtag
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