Shewanella japonica: SJ2017_2862
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Entry
SJ2017_2862 CDS
T04959
Name
(GenBank) Proline--tRNA ligase
KO
K01881
prolyl-tRNA synthetase [EC:
6.1.1.15
]
Organism
sja
Shewanella japonica
Pathway
sja00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
sja00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
SJ2017_2862
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
sja01007
]
SJ2017_2862
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sja03016
]
SJ2017_2862
Enzymes [BR:
sja01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.15 proline---tRNA ligase
SJ2017_2862
Amino acid related enzymes [BR:
sja01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
SJ2017_2862
Transfer RNA biogenesis [BR:
sja03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
SJ2017_2862
Prokaryotic type
SJ2017_2862
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
tRNA_edit
HGTP_anticodon
PTS_EIIC
Motif
Other DBs
NCBI-ProteinID:
ARD23141
UniProt:
A0ABM6JMT9
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Position
3387084..3388799
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AA seq
571 aa
AA seq
DB search
MRVSNYLLSTQKETPANAEVISHQLMLRAGFIRRNASGLYSWLPSGLRVLRKVEAIVREE
MNNAGAVEILMPLVQPADLWAETGRWEKFGPELLRFQDRHNRDFVLGPTHEEVITDLVRK
EVSSYKQLPLNLYQVQTKFRDEVRPRFGVMRAREFLMKDAYTFHLSQECLDNTYAQMHNA
YSKIFERMGLAFRPVIADTGSIGGSASHEFHVLANSGEDLIAYSNGSDYAANIEKAETAE
PTTTLAAPTQEMTLVDTPNAKTIAELVEQFDVEITKTVKTLIVKGATEEAPLVALIVRGD
HELNELKADKHELVAAPLEFATDAEIKDAIGASTGSLGPVGLTMPVIIDKDVAVMSDFAA
GANQDGKHHFGINWERDLPMAQAMDLRNVVEGEPTPDGKGTYEFARGIEVGHIFQLGTNY
SEAMGATVLDENGKAKEMLMGCYGIGVSRIVAAAIEQNHDDRGMMLPATLAPFTVGILPM
NMHKSHRVKEMAEQLYKDLSAEGIEILLDDRKERPGVMFNDMELIGLPHVVVIGDRNIDA
GVFEYKNRRTGEKQEIPFDQIVDFIKSSIKG
NT seq
1716 nt
NT seq
+upstream
nt +downstream
nt
atgcgagttagcaattacctgctttcaacacaaaaagaaactcctgcaaatgcagaagtg
atcagtcatcaattaatgttacgtgcaggttttatccgccgtaatgcatcaggcctttat
tcatggctgcccagcggattacgcgtattgcgtaaagttgaggcgattgttcgtgaagaa
atgaataatgctggtgctgttgaaatcttaatgcccctagttcagcctgccgatttatgg
gctgaaactggtcgctgggaaaaattcggtccagaattgctccgctttcaagatcgccac
aatcgcgacttcgtattaggtccaactcatgaagaagtcattaccgaccttgtacgtaaa
gaagttagctcttataagcaattaccattgaacttatatcaagttcaaacaaaattccgt
gatgaggttcgtcctcgttttggtgtgatgcgtgctcgtgagttcttgatgaaagatgct
tacacattccatttaagccaagagtgtttagataacacctacgcacaaatgcataatgca
tacagtaaaatttttgagcgtatggggttagctttccgtcctgttatcgcagatacaggc
tcaattggcggcagtgcttcacacgaattccatgtacttgcaaatagcggcgaagattta
attgcttactcaaacggcagtgattacgcagccaatatcgagaaagcagaaacagctgag
cctacaacaacgttagccgcaccaactcaagaaatgactttagttgatacgccaaatgct
aaaacgattgccgagttagttgaacaatttgacgttgaaatcactaaaacagtgaaaaca
ttgattgttaaaggtgcgactgaagaagcgccccttgtagcgctaatcgtacgtggcgat
catgagctcaatgaattaaaagctgataagcacgaacttgttgctgcaccacttgagttt
gcaactgacgcagaaatcaaagatgccattggcgcaagcactggctctttaggccctgta
ggcttaacaatgccagttatcattgacaaagatgttgctgtaatgagcgattttgcagcg
ggtgccaaccaagatggaaaacatcattttggtatcaactgggaacgtgacttaccaatg
gcgcaagcgatggatcttcgcaatgttgttgaaggtgagcctacgcctgacggtaaaggt
acttacgagtttgctcgtggtatcgaagtgggtcacatcttccaacttggaaccaattac
tcagaagccatgggtgcaaccgtacttgatgaaaacggtaaagcaaaagaaatgctgatg
gggtgttatggtatcggtgtcagtcgtattgttgctgcagcaattgagcaaaaccacgac
gaccgaggcatgatgttgccagcgacccttgccccattcactgtgggtattttaccgatg
aacatgcacaaatcgcatcgtgtaaaagaaatggcagagcagttatacaaagatttgagt
gctgaaggcattgaaatcttactggacgatcgtaaagagcgcccaggtgtcatgttcaat
gacatggagctaattggtctacctcacgttgtcgtaattggtgaccgtaatatcgacgcg
ggtgtatttgaatataaaaatcgccgcactggtgaaaagcaagaaattccttttgaccaa
atcgttgacttcattaagtcatctattaaaggctaa
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