KEGG   Shewanella japonica: SJ2017_2887
Entry
SJ2017_2887       CDS       T04959                                 
Name
(GenBank) transcriptional regulator GcvA
  KO
K03566  LysR family transcriptional regulator, glycine cleavage system transcriptional activator
Organism
sja  Shewanella japonica
Brite
KEGG Orthology (KO) [BR:sja00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:sja03000]
    SJ2017_2887
Transcription factors [BR:sja03000]
 Prokaryotic type
  Helix-turn-helix
   LysR family
    SJ2017_2887
SSDB
Motif
Pfam: LysR_substrate HTH_1 HTH_30 HTH_5
Other DBs
NCBI-ProteinID: ARD23165
LinkDB
Position
complement(3419625..3420536)
AA seq 303 aa
MSRRLPPLNAVKAFEAAARHLSFTRAAEELFVTQAAVSHQIKALEDFLGLKLFRRKNRSL
LLTEEGQSYFLDIKDIFIQLGESTDRLLARSAIGSLTVSMSPSFAIQWLVPRLAKFSEKN
PDIDVRIKAVDSEVDSLTDDVDVAIYYGQGNWPGLRADKLRNEVLIPVCSPLLLSGPKPL
EKPSDLKNHTLLHDSSRQDWQAWFRQCGISEINVNSGPIFSHSSLVLQAAAHGQGVALGY
SVLARPDIKAGRLVCPFSEILVSKDAYYLVCQQSHSELGKVAAFREWMVDMFAEESRSEL
LAG
NT seq 912 nt   +upstreamnt  +downstreamnt
atgtcgagaagattgccacctttgaatgcagtcaaagcattcgaggctgctgcgaggcac
ttaagttttactcgagcggcagaagagctatttgtcacgcaagcagcagtcagtcaccag
ataaaagcactagaagattttttgggcttaaaactatttcgacgcaaaaatcgctcgcta
ttattgactgaagaaggccaaagctacttcctcgatatcaaagatatttttatccaatta
ggcgaatctaccgataggctattagccagaagcgcgattggttcgttaacggtaagcatg
tcaccaagctttgcaattcaatggcttgtgccaagacttgcaaagtttagtgagaaaaac
ccagacattgatgtgcgaattaaagctgtagatagcgaggtcgactcattgactgatgat
gtcgatgtcgctatttattatggtcaaggtaattggcctgggctacgtgcagataaactt
cgtaatgaagtgttaattcctgtttgttcaccgctgttattgagcggtcctaagcctctt
gaaaaacccagcgatttaaaaaatcacaccttattacacgactcgagtcgtcaagattgg
caggcttggtttagacaatgcgggattagtgaaattaatgttaattctggtcctatcttc
agccattcatcattagtattgcaagctgcggctcatggtcaaggtgtggcattggggtat
agcgtattggcaaggcctgatattaaagccggtcgacttgtgtgtccgttctcggaaata
ttagtcagtaaagacgcttattaccttgtgtgtcagcagagccactcagagctcggaaaa
gtggcagctttcagagaatggatggtagatatgtttgctgaagagtcacgcagtgagcta
ttagctggttag

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