Shewanella japonica: SJ2017_2938
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Entry
SJ2017_2938 CDS
T04959
Name
(GenBank) Flagellar M-ring protein FliF
KO
K02409
flagellar M-ring protein FliF
Organism
sja
Shewanella japonica
Pathway
sja02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
sja00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
SJ2017_2938
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
sja02044
]
SJ2017_2938
02035 Bacterial motility proteins [BR:
sja02035
]
SJ2017_2938
Secretion system [BR:
sja02044
]
Type III secretion system
Flagellar export apparatus
SJ2017_2938
Bacterial motility proteins [BR:
sja02035
]
Flagellar system
Flagellar assembly proteins
M, S, P and L rings
SJ2017_2938
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YscJ_FliF
YscJ_FliF_C
Motif
Other DBs
NCBI-ProteinID:
ARD23216
LinkDB
All DBs
Position
complement(3472303..3473997)
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AA seq
564 aa
AA seq
DB search
MSTDLVLDSDTVDSTGIQQENKSGLMSSFGSADFMRQITMILALAVCLVLAVFMMIWAQE
PEFRPLGQMETNEMIQVLDVLDKNKIAYKISGDVVSIPEDKYQDVKLLLGRAGVETSSQP
TDYLSKDSGFGVSQRMEQARLKQSQEVNLARAIEELKSVTRAKVILALPKENVFARNKSK
PSATVVVNVRRGSLGQEEIDSIVDIVASAVQGLEPTRVTVTDSNGRLLNSGSQDGASARA
RREQELVQQKESEYRNKVDSILMPILGPENFTSQVDVNMDFTAVEQTAKRFSPDLPAVRS
EMTIERNSSGQAMGGIPGALSNQPPMESDIPQEVGESEATAATGDSFREATRNFELDTTI
SHTRQQVGVVRRLSVSVAIDYKPGPVDENGVVTRVPRTEQELTNIRRLLEGAMGFTSQRG
DTLEVVTVPFMDQLIEELPALEMWEQPWFWRAVRLILGALLVLVLILFVIRPMLNRLLKS
NEVEMPEETRLGHELAEIEDQYAADTLGMLNTQQADYSYADDGSIQIPNLHKDDDMIKSI
RALVANEPELSTQVIKSWLQEDGK
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
gtgagcacagatctcgtattagattcagataccgttgatagcacagggattcagcaagag
aacaaatctggcttaatgagttcatttggcagtgctgatttcatgcgtcaaatcaccatg
atattagcgttggcagtctgtttggtgctggcggttttcatgatgatttgggcgcaagag
cctgagtttagacctctaggtcagatggaaaccaatgaaatgatccaggttctggacgtt
ctcgataaaaataaaattgcctataaaatttctggtgatgtagtcagtattccagaagat
aagtatcaagatgtaaaattactattaggccgtgcaggtgttgaaacctcaagccaacca
actgattatttgagtaaagatagtggctttggtgtgagtcaacgcatggagcaggcgaga
ttaaaacaaagccaagaagtcaatttagctcgtgcaattgaagagcttaaaagtgttact
cgtgccaaagtgattctagcgttaccaaaagaaaatgtatttgccagaaacaaatctaaa
cctagcgcaaccgtagtcgttaacgtgcgccgtggcagcttaggccaagaagaaattgat
tccattgttgatattgtcgcttctgctgttcagggtttggagcctactcgagtcacagtg
actgactctaatggccgtttacttaactctggaagccaagatggcgcttcagcaagagct
cgccgtgaacaagagttagttcaacaaaaagaatctgaataccgtaataaagttgattct
attttaatgccgattttaggccctgaaaactttacctcgcaagtggatgtcaatatggac
ttcactgccgttgagcaaacagcaaaacgtttttctcctgatttaccagcagtacgcagc
gaaatgaccattgagcgtaattcatcgggtcaggcaatgggtggtattccaggtgcatta
tcaaaccaaccacctatggagtctgatattccacaagaagtgggtgaatctgaagccact
gcagctactggagacagtttccgtgaagcgactcgtaactttgagcttgatacgactatt
agtcatactcgtcagcaagttggcgtggttagaaggttaagtgtatcagttgctattgac
tacaagcctggacctgttgatgaaaatggtgtggtaacaagagtacctagaaccgaacaa
gagctgactaatatccgacgtttattagaaggggcgatggggtttaccagtcaacgtggt
gatacgttggaggtggtaacggttccatttatggaccaactaattgaagagttgccagcg
cttgaaatgtgggagcaaccatggttttggcgagcggtaaggctaatactaggcgcatta
ttagtgctagttctgatattatttgttattcgtccaatgctaaacaggttattgaaatct
aacgaagttgagatgcctgaagaaacacgtttaggccatgagcttgctgaaattgaagat
cagtacgccgcagacacattaggcatgttaaatactcagcaagctgattacagttatgct
gatgacggttcaattcaaataccgaacctgcataaagatgatgatatgatcaagtcgatt
agggcattagtggctaatgaacctgaactttctacccaagtaattaagagttggttacaa
gaagatggcaaatga
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