Shewanella japonica: SJ2017_3124
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Entry
SJ2017_3124 CDS
T04959
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
sja
Shewanella japonica
Pathway
sja00260
Glycine, serine and threonine metabolism
sja00460
Cyanoamino acid metabolism
sja00630
Glyoxylate and dicarboxylate metabolism
sja00670
One carbon pool by folate
sja00680
Methane metabolism
sja01100
Metabolic pathways
sja01110
Biosynthesis of secondary metabolites
sja01120
Microbial metabolism in diverse environments
sja01200
Carbon metabolism
sja01230
Biosynthesis of amino acids
sja01240
Biosynthesis of cofactors
sja04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
sja00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
SJ2017_3124
09102 Energy metabolism
00680 Methane metabolism
SJ2017_3124
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
SJ2017_3124
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
SJ2017_3124
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
SJ2017_3124
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
SJ2017_3124
Enzymes [BR:
sja01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
SJ2017_3124
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Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
DegT_DnrJ_EryC1
OKR_DC_1
Motif
Other DBs
NCBI-ProteinID:
ARD23393
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Position
complement(3698088..3699344)
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AA seq
418 aa
AA seq
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MLKKAMNIADYDPQLFQAIEDETRRQEEHIELIASENYTSPRVLEAQGSQLTNKYAEGYP
GKRYYGGCEHVDIAEELAISRAKELFGATYANVQPHSGSQANSAVFMALLQGGDTVLGMS
LAHGGHLTHGSHVSFSGKLYNAVQYGIDETTGKIDYAEVERLAVEHKPKMIIAGFSAYSG
IIDWGKFREIADKVGAYLFVDMAHVAGLVAAGIYPNPLPHAHVVTTTTHKTLAGPRGGLI
LSASNDEDIYKKLNSAVFPGGQGGPLMHVIAAKAVAFKEALDPEFTTYQEQVVANAKVMA
KTFIERGYDVVSGGTDNHLFLLDLISKDMTGKDADAALGKANITVNKNSVPNDPRSPFVT
SGLRIGSPAITRRGFTETESVELTNWMCDVLDDINNEATIERVKNQVLELCAKFPVYG
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atgctaaagaaagctatgaatatcgcggattacgatccacaactgtttcaagccattgaa
gatgagactcgtcgccaagaagagcacattgaattaatcgcatcagaaaattataccagc
ccacgtgttcttgaagcacaaggttctcagttaaccaataagtacgcagaaggttaccct
ggtaagcgttactatggtggttgtgagcatgttgatattgctgaagaattagctatttca
cgtgctaaagagttgttcggcgcaacatacgctaatgttcagccgcattctggttctcag
gcaaactcagctgttttcatggcgcttttacaaggtggtgacaccgttttaggtatgagc
ctggcacacggtggtcacttgactcacgggtctcatgtgagcttttcaggcaaattatac
aatgcggttcagtacggtattgatgaaacgactggcaaaatcgattatgcagaagtagag
cgtttagctgttgaacataagcctaaaatgattattgctggtttctctgcatattcaggt
atcatcgattggggtaaattccgcgaaatcgctgacaaagtaggtgcttacttatttgtt
gatatggcccacgttgcaggtcttgttgctgctggtatctatccgaacccgttaccacat
gctcacgtagtgacaacgacgacacacaaaacacttgccggtcctcgtggtggattaatt
ttatctgcatcaaacgatgaagatatctataaaaaattaaactcagcagtattccctggc
ggtcaaggtggtccattaatgcacgttattgcagctaaagcagttgcatttaaagaagca
ttagatccagagtttacgacttaccaagagcaagttgttgccaacgctaaagtgatggct
aaaacctttatcgaacgtggctatgatgtggtatctggcggtactgataaccacttattc
ctgcttgatttaatcagcaaagatatgactggtaaagatgctgatgctgccttaggcaaa
gctaacatcacagtgaacaaaaactcggtgccaaatgatccacgttcaccgtttgtgact
tcaggtttacgtattggttctcctgcaattacacgtcgtggttttactgaaactgaatca
gttgaattaaccaactggatgtgtgatgtacttgacgatattaataatgaagccacgatt
gagcgtgtgaagaatcaagtgcttgaattatgtgctaagttccctgtttacggttaa
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