Shewanella japonica: SJ2017_3170
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Entry
SJ2017_3170 CDS
T04959
Name
(GenBank) Ribosomal RNA large subunit methyltransferase E
KO
K02427
23S rRNA (uridine2552-2'-O)-methyltransferase [EC:
2.1.1.166
]
Organism
sja
Shewanella japonica
Brite
KEGG Orthology (KO) [BR:
sja00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sja03009
]
SJ2017_3170
Enzymes [BR:
sja01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.166 23S rRNA (uridine2552-2'-O)-methyltransferase
SJ2017_3170
Ribosome biogenesis [BR:
sja03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
SJ2017_3170
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FtsJ
Methyltransf_31
Methyltr_RsmB-F
Motif
Other DBs
NCBI-ProteinID:
ARD23438
LinkDB
All DBs
Position
complement(3759877..3760506)
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AA seq
209 aa
AA seq
DB search
MATKKRSASSSRWMQEHFDDHYVKLSQKRGLRSRAAFKLEEIQQKDKLIKPGMTVVDLGA
APGGWSQIAVKLVGEKGKLVACDILPMDPIVGVDFLQGDFREEKVLDALLDRVGEDKVDV
VLSDMAPNMSGSDGVDQPRAMYLVELALDMCHQVLASNGSFAVKVFQGEGFDEYMKAVRQ
AFTTVKTRKPDSSRPRSREVYIVATGYKL
NT seq
630 nt
NT seq
+upstream
nt +downstream
nt
atggcaacgaaaaaacgttcggcaagttcaagccgatggatgcaagaacattttgacgat
cattacgttaaactgtcacaaaagcgaggcttacgctctcgagctgcattcaagttggaa
gaaatccaacagaaagataaattgattaaaccaggcatgacagtggttgatttaggtgca
gcgcctggtggctggtcacagattgctgttaaattggttggagaaaaaggcaagcttgtt
gcttgtgatattttaccaatggatccaattgtgggagttgactttttacaaggtgatttc
cgtgaagagaaagtacttgatgctttacttgaccgtgttggtgaggataaagtggatgta
gtgctttctgatatggcgcctaatatgagtggttcagacggtgtggaccaacctagggcg
atgtatcttgttgaattagcattagatatgtgtcatcaagtattggcatctaatggtagt
tttgcagttaaagtctttcagggggagggctttgatgaatatatgaaagcagttcgacaa
gctttcactacagttaaaacacgaaaaccagattcatcgcgaccacgttcacgtgaagtg
tatatagtggcgactggttacaagttatag
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