Shewanella japonica: SJ2017_3225
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Entry
SJ2017_3225 CDS
T04959
Name
(GenBank) vitamin B12 transport system substrate-binding protein
KO
K06858
vitamin B12 transport system substrate-binding protein
Organism
sja
Shewanella japonica
Pathway
sja02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
sja00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
SJ2017_3225
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sja02000
]
SJ2017_3225
Transporters [BR:
sja02000
]
ABC transporters, prokaryotic type
Metallic cation, iron-siderophore and vitamin B12 transporters
Vitamin B12 transporter
SJ2017_3225
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_2
Motif
Other DBs
NCBI-ProteinID:
ARD23490
UniProt:
A0ABM6JQ59
LinkDB
All DBs
Position
complement(3819435..3820349)
Genome browser
AA seq
304 aa
AA seq
DB search
MLFLTKLSRIWAITALVLMTSVTLNTANAAQETHLLGKATSKVIDTAIPQKTAKRVIALS
PHAVEMLFAIGAGETIVATTDHADFPEEAKAIPSIGGYYGIQMERVIELNPDLIVVWQSG
NKLDDINQLTQLGFNVFNSDPKSLDDVAKELLQLGELTGHQEKAQQAADEYRLQLSKIKK
SNAQKPAIKVFYQLWSTPLMTVSKGSWIEHIISACHGENVFLDAASEYPQISVENVLLTD
AEVILQSQDEGNIIGVDWSKWPELPAVKNNHIYQLNADLLHRASPRAILGVQALCAALDN
ARVN
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atgttgtttcttactaaattgagccgtatttgggcaataacggcactcgtattgatgacg
tcagtaacactcaatacagccaatgcagcacaagaaacacatctgttaggcaaggcaaca
agcaaggtaatagacaccgctatcccccagaaaacagctaagcgtgtcattgccttatct
cctcatgcagtagaaatgttatttgccattggtgcaggcgagacaatagttgcaaccacg
gaccatgctgattttcctgaagaagccaaagcgattccgagtattggtggttattacggt
attcaaatggagcgcgttattgagctcaatccagatcttattgttgtttggcaaagcggt
aataagctggatgatatcaatcaattaacccaattaggctttaacgtgtttaatagcgac
cctaagagtttagatgatgtcgccaaagagttattgcaacttggtgagttaactggccat
caagaaaaagcacaacaagccgctgatgagtatcgattacagcttagtaaaatcaaaaaa
agtaacgcccaaaaaccagcaataaaggtattttatcaattatggtctacgcctttaatg
acagtatctaaaggcagttggattgagcacattattagtgcatgtcatggcgagaatgtg
tttcttgatgctgcgagtgaatacccacaaatcagtgttgaaaatgtattactcaccgat
gcagaagtgattttacaaagccaagatgaaggcaatattattggtgtcgattggtcaaag
tggcctgaattaccagcagttaaaaacaatcatatctaccagcttaatgcagacttactg
catcgagcctcccccagagccatcttaggtgtgcaagcattatgtgcagccttagacaac
gccagagtcaactga
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