Shewanella japonica: SJ2017_3286
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Entry
SJ2017_3286 CDS
T04959
Name
(GenBank) Pseudouridine synthase
KO
K06183
16S rRNA pseudouridine516 synthase [EC:
5.4.99.19
]
Organism
sja
Shewanella japonica
Brite
KEGG Orthology (KO) [BR:
sja00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sja03009
]
SJ2017_3286
Enzymes [BR:
sja01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.19 16S rRNA pseudouridine516 synthase
SJ2017_3286
Ribosome biogenesis [BR:
sja03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
SJ2017_3286
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
S4_2
Motif
Other DBs
NCBI-ProteinID:
ARD23546
LinkDB
All DBs
Position
complement(3886504..3887193)
Genome browser
AA seq
229 aa
AA seq
DB search
MRLDKFICESTELTRSLAKRVLKSGEVTCDGVVIKDASFKVGTDTEVCIEGRKIEVIGER
YIMMNKPVDTICSTIDEEYQSVLSLMDIEKVETLHIAGCLDVDTTGLVLITSDGLWSHKI
TSPKKDCGKRYYVEVAEPLDEALIETFAEGVQLRNEDGLTKPAILDIIDATHARLTISEG
KYHQVKRMFAAVGNKVINLHREAIGKIEMEDDLLEGEWRYLTDEEVKSV
NT seq
690 nt
NT seq
+upstream
nt +downstream
nt
atgcgtttagataaatttatctgtgaaagtactgagctgactcgctcattagcaaaaaga
gtattgaagtcaggtgaagtgacctgtgacggcgtcgtgattaaagatgccagctttaaa
gtgggcactgatactgaggtttgcattgaaggacgcaaaatcgaggttattggcgaacgc
tacattatgatgaataagcctgtcgatacgatttgctcaactattgatgaagagtaccag
tctgttttgagtttaatggatatcgaaaaagttgagacgttacacattgctgggtgtttg
gatgtggacacaactggccttgtattaattaccagtgatggcttgtggtctcacaagatt
acctcacctaaaaaagactgtggcaaacgctactatgttgaagtcgctgaaccactggat
gaagcgttaattgagacttttgctgaaggtgtccaattacgaaatgaagatggcctaact
aaaccagcgatacttgacattattgatgctactcatgccagactaactataagtgaaggt
aagtatcaccaagtgaaacgtatgtttgcagctgtgggcaataaggtgattaatctgcat
cgtgaagccataggtaaaattgaaatggaagatgacctgttagaaggtgagtggcgttac
cttactgatgaagaagtgaaatcagtttaa
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