Shewanella japonica: SJ2017_3508
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Entry
SJ2017_3508 CDS
T04959
Name
(GenBank) lysine--tRNA ligase
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
sja
Shewanella japonica
Pathway
sja00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
sja00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
SJ2017_3508
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
sja01007
]
SJ2017_3508
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sja03016
]
SJ2017_3508
Enzymes [BR:
sja01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
SJ2017_3508
Amino acid related enzymes [BR:
sja01007
]
Aminoacyl-tRNA synthetase
Class II (A)
SJ2017_3508
Transfer RNA biogenesis [BR:
sja03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
SJ2017_3508
Prokaryotic type
Other AARSs
SJ2017_3508
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
Motif
Other DBs
NCBI-ProteinID:
ARD23757
LinkDB
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Position
complement(4150253..4151755)
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AA seq
500 aa
AA seq
DB search
MTEQTQDENKLIAERRAKLDHIRENCPANGHPNNFDRKHKAADIQKEYGHYTKPELEEMG
VQRSIAGRVMAKRGPFLVIQDVSGRIQAYAGKDVQKDLKATYQGLDIGDIVGVTGQLHLS
GKGDLYVNMEEYQLLTKALRPLPEKFHGLSDQETRYRQRYVDLIVNEDSREAFIMRSKVV
TAIRNFMVKKEFMEVETPMMHSIPGGASARPFITHHNALDIEMYLRIAPELYLKRLVVGG
FERVFEVNRNFRNEGLSPRHNPEFTMMEFYMAYADFNDLMDLTEEMLSSIATELCGSPQL
PYGEHTVDFGGPYARMSMLDAIKKYNPDNETIQSMTYEEVKDVEFMRNLAKSIGMSIEKF
WTCGQLLEEIFGETAEPQLMQPTFITGYPADISPLARRNDENHFITDRFEFFIGGREVAN
GFSELNDAEDQDNRFKAQVDAKDAGDDEAMFYDADYITALEHGLPPTAGQGIGIDRLVML
FTNTHTIRDVILFPAMRPQG
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atgactgaacaaacccaagacgaaaacaagttaattgcagaacgtcgcgcgaaactagat
cacatccgcgaaaactgccctgctaatggtcacccgaacaacttcgatcgaaaacataag
gctgctgatattcaaaaagaatacggccactacactaagcctgagctagaagaaatgggc
gttcaacgttctattgcgggtcgtgttatggctaaacgtggtccattcttggttattcaa
gatgtgtctggccgcattcaagcttatgcaggtaaagatgttcaaaaagatttaaaagcg
acttaccaaggtttagacattggtgacatcgtcggcgtaaccggtcaacttcacctttca
ggtaaaggcgatttatacgtgaacatggaagagtaccaattgctaacaaaagcattgcgt
ccactaccagaaaaattccacggtctatcagatcaagaaacgcgctaccgtcagcgctac
gttgatttaatcgttaacgaagactcacgtgaagccttcatcatgcgctctaaagtcgtt
actgctattcgtaacttcatggtgaaaaaagagttcatggaagttgaaaccccaatgatg
cacagcatcccaggtggcgcttcagctcgtccatttattacacatcacaatgcgttagac
atcgaaatgtacttacgtattgcgccagagctttacctaaaacgtcttgttgttggtggt
tttgagcgtgtgtttgaagttaaccgtaacttccgtaatgaaggtttatcgccacgtcat
aacccagaattcactatgatggaattctatatggcatacgctgatttcaatgacctaatg
gacttaacagaagaaatgctaagttcaatcgcaactgagctttgtggttcaccacaactg
ccatacggcgagcacaccgttgattttggcggtccatacgcacgtatgagcatgttagat
gcgattaagaagtacaacccagacaacgaaacgattcagtctatgacttatgaagaagtt
aaagacgttgagtttatgcgtaaccttgcgaaaagcattggtatgagcatcgagaaattc
tggacttgtggtcaactacttgaagaaatcttcggtgaaacggcagagccacagttaatg
caacctacgttcattacgggttacccagctgacatctcaccacttgcacgtcgcaatgac
gaaaaccacttcattaccgaccgtttcgagttcttcatcggcggccgtgaagtcgcgaat
ggtttctctgagcttaacgatgcagaagatcaagacaaccgctttaaagcgcaagttgat
gctaaagatgcaggtgatgacgaagcaatgttctacgatgctgattacatcacagcacta
gagcacggtttaccaccaactgctggtcaaggcattggtatcgatcgtttagtgatgttg
tttactaacactcacactatccgtgacgtgattttgttcccagcaatgcgcccacaaggg
taa
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