Shewanella japonica: SJ2017_3536
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Entry
SJ2017_3536 CDS
T04959
Name
(GenBank) ABC transporter ATP-binding protein
KO
K06158
ATP-binding cassette, subfamily F, member 3
Organism
sja
Shewanella japonica
Brite
KEGG Orthology (KO) [BR:
sja00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
sja03012
]
SJ2017_3536
Translation factors [BR:
sja03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
SJ2017_3536
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_tran_Xtn
AAA_21
SMC_N
MMR_HSR1
AAA_29
AAA_23
RsgA_GTPase
ABC_tran_CTD
AAA_16
DUF815
MeaB
ATP-synt_ab
fvmX2
DUF7623
Motif
Other DBs
NCBI-ProteinID:
ARD23785
LinkDB
All DBs
Position
4188631..4190538
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AA seq
635 aa
AA seq
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MINISQAQLIRGTKTLLDDADLTVYPGHKVGLVGANGTGKSSLLALILGNLQLDKGDFNL
PAGWQIATVAQETPALEVSALEYVLDGDVEFRQLEAQLNQAQEDNDGHNIALIHGKIDAI
GGYAIRSRAGALLAGLGFSETEQSSPVKSFSGGWRMRLNLAQALLCRSDLLLLDEPTNHL
DLDTMYWLEGWIKAYQGTLILISHDRDFIDGIVDEIVHVEHAKLNYYKGNYSAFERIRAE
RLSQQQAAFERQQKERAHMQSFVDRFRYKASKAKQAQSRLKALEKMANLLPSQVDSQFHM
AFREPDALPNPLVTMENVSIGYGDKTILSEVKLNLVPGARIGLLGRNGAGKSTLIKLLTG
ELAPKTGKYQPNPGLNIGYFAQHQIEFLSLDDSPLQHMVRLAPNAKELELRNFLGGFGFN
GDMALSAVGPFSGGEKARLVLALLVWQKPNVLLLDEPTNHLDLEMRHALTMALQTFEGAM
VIVSHDRHLLRLSCSDYYLVDQGAVKPFQGDLDDYHQWLLDAAKAAQPVSDDNNVKPAVD
KKLQKRLEAELRQKVSPLRKQQIKLETQQQKITSRLSELETELADGSLYEAENKAKMTKV
LNERTELTQAMDESEMTWLELQEQIEVIEQEFTLS
NT seq
1908 nt
NT seq
+upstream
nt +downstream
nt
atgattaacatcagtcaagcccagctcatccgtggaacaaaaaccttactcgatgacgcc
gatctcaccgtataccctggtcataaagttggcctagtaggcgcaaacggaaccggtaag
tcttcattgttggccttgattttaggtaacttacaactcgataaaggtgattttaacctt
ccagcaggctggcaaattgcgactgtagcgcaagaaacgcctgcattagaagtctcagca
ttagaatacgtgcttgatggtgacgttgagtttagacaacttgaggctcaactcaatcaa
gcacaagaagataatgatggtcataacattgcgctgatacatggcaaaatcgacgccatt
ggtggctatgcaatccgatcacgagcgggtgcattattagcgggcttaggttttagtgaa
acagaacaaagtagcccagtaaaaagtttctcaggtggctggcgtatgcgccttaactta
gcacaggctttattatgtcgctctgatcttttacttctcgatgaacctaccaaccactta
gatttagataccatgtattggcttgaaggttggattaaagcatatcaaggcacactgatc
cttatcagtcatgaccgtgactttattgatggtattgtggatgaaattgttcacgtcgag
catgccaagcttaactattacaaaggtaattacagtgcctttgaacgtattcgtgctgaa
cgcttatcacagcaacaagccgcatttgaacgtcaacaaaaagaacgtgcccacatgcaa
tcttttgttgatcgtttcaggtataaagctagcaaagccaaacaagctcaaagccgctta
aaagccttagaaaaaatggctaacctgttgccttctcaagttgacagccaatttcatatg
gcgtttcgtgagccagatgccctaccaaatccgctagtgaccatggaaaatgtttctatt
ggttacggtgataaaacaattctaagtgaagtaaagctcaaccttgtgccaggtgctcga
atcggcctacttgggcgcaatggtgcaggtaagtcgactcttatcaaattacttactggc
gaattagcgccgaaaacaggtaaataccaacctaatccagggctaaatattggttacttt
gctcagcatcaaatcgaatttttaagtttggatgatagcccattgcaacatatggtgcga
ttagcgccaaatgccaaagagcttgaattacgtaacttcttaggtgggtttggctttaat
ggtgatatggctttgtctgctgtcgggccattttctggtggtgaaaaagcccgcctagta
ttagccctattagtttggcaaaaaccaaacgttttgctattagatgaacccaccaaccac
cttgatttagaaatgcgccatgcgctgacaatggccttgcaaacttttgaaggtgccatg
gtcatcgtgtcacatgatcgacatcttttacggttaagctgtagcgattattaccttgta
gaccaaggcgctgttaaaccattccaaggcgacttagacgactatcatcaatggctactt
gatgcagcaaaagctgcacaaccggtttcagatgataataatgtaaagccagcagtcgat
aaaaagctgcaaaaacggttagaagcagagttgagacaaaaggtatcgcctttacgtaag
caacaaatcaaacttgaaactcaacagcaaaaaataaccagtcgtttaagtgagcttgaa
acagaattggcagatggttcactgtatgaagctgaaaataaagctaaaatgacgaaagtg
ctcaatgaacgaacagaactgactcaagcaatggatgaaagtgaaatgacttggctagag
ctacaagagcaaatcgaagttattgaacaagaatttacgcttagctaa
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