Shewanella japonica: SJ2017_3563
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Entry
SJ2017_3563 CDS
T04959
Name
(GenBank) Cytochrome b
KO
K00412
ubiquinol-cytochrome c reductase cytochrome b subunit
Organism
sja
Shewanella japonica
Pathway
sja00190
Oxidative phosphorylation
sja01100
Metabolic pathways
sja02020
Two-component system
Module
sja_M00151
Cytochrome bc1 complex respiratory unit
Brite
KEGG Orthology (KO) [BR:
sja00001
]
09100 Metabolism
09102 Energy metabolism
00190 Oxidative phosphorylation
SJ2017_3563
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
SJ2017_3563
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
sja03029
]
SJ2017_3563
Mitochondrial biogenesis [BR:
sja03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial DNA-encoded proteins
Mitochondrial respiratory chain complex III
SJ2017_3563
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cytochrome_B
Cytochrom_B_N_2
Cytochrom_B_C
Motif
Other DBs
NCBI-ProteinID:
ARD23812
LinkDB
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Position
complement(4217172..4218386)
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AA seq
404 aa
AA seq
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MVKNIVDWIDARIPMTATYNRHVGQYPTPKNFNFWYFFGSLALLVLVNQLLTGIWLTMNY
VPTAEGAFASVEYIMRDVEYGWLLRYMHSTGASAFFVVVYLHMFRGLIYGSYQKPRELLW
LFGMLIFLVLMAEAFMGYLLPQGQMSYWGAQVIISLFGAIPFIGDDLTLWIRGDYVVSGA
TLNRFFALHVIALPLVLVVLVFLHLIALHEVGSNNPDGVEVKKNKDENGWPVDAIPFHPY
YTVKDIMGVAGFLIVFCYVLFFMPEGGGYFLEKPNFEAANPMKTPEHIAPVWYFTPFYAI
LRAIPDKPLGVVGMGLAIAVLFVLPWLDRCKVKSIRYRGLIHKINIAQFTVSFLILGYLG
AVPATPTLTIAARIFTLTYFGFFVALWVYSKNEKTKPVPTRVTH
NT seq
1215 nt
NT seq
+upstream
nt +downstream
nt
atggttaagaatattgttgattggattgatgctcgcatcccaatgacggcgacgtataac
cgtcacgttggtcaatatccaacaccaaagaacttcaacttttggtatttctttggttca
ttagcattgcttgttttagttaaccagttgcttactggtatttggttaacaatgaattat
gtaccaactgcagaaggtgcgtttgcttctgttgaatacatcatgcgtgatgttgagtac
ggctggttattacgttacatgcactccacaggagcttctgctttctttgtggtggtttat
cttcatatgttccgtggcttaatctacggttcttaccaaaagccaagagagctactttgg
ttattcggtatgttgattttcctcgtgttaatggctgaagcctttatgggttacttgcta
cctcagggacaaatgtcttactggggcgcgcaggtaattatctcattgtttggtgctatt
ccatttattggtgatgacctgacattgtggatccgtggtgattatgtcgtttcaggtgca
acactaaaccgtttctttgcattgcatgttattgcactgcctttagtgttagttgtatta
gttttccttcacttaattgctttacatgaagtgggttcaaacaacccagatggtgttgaa
gttaagaagaataaagatgaaaacggatggccagttgatgctattcctttccacccttat
tacacagttaaagacatcatgggtgtggccggtttcttaatcgtgttctgctatgtgttg
ttctttatgcctgaaggtggcggttacttccttgaaaagccaaactttgaagcggctaac
ccaatgaagacccctgaacatattgctccggtttggtacttcacaccgttttacgcaatt
ttacgtgcgattccagacaagccattaggcgttgtcggtatgggtcttgcgattgcggta
ctgtttgtacttccttggttagatcgctgtaaagttaaatctatccgttaccgtggctta
atacacaagattaatatcgcacagtttaccgtgtctttcttaatcctgggttacttaggt
gctgtaccagcaacaccaacgttaacaattgcagctcgtatctttacacttacttatttt
ggtttcttcgtggcactgtgggtttacagtaaaaatgagaaaacaaaaccggttcctacg
agggtgacacactaa
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