Shewanella japonica: SJ2017_3769
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Entry
SJ2017_3769 CDS
T04959
Name
(GenBank) fumarate reductase flavoprotein subunit
KO
K00233
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
7.1.1.12
]
Organism
sja
Shewanella japonica
Pathway
sja00020
Citrate cycle (TCA cycle)
sja00190
Oxidative phosphorylation
sja00620
Pyruvate metabolism
sja00650
Butanoate metabolism
sja00720
Other carbon fixation pathways
sja01100
Metabolic pathways
sja01110
Biosynthesis of secondary metabolites
sja01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
sja00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
SJ2017_3769
00620 Pyruvate metabolism
SJ2017_3769
00650 Butanoate metabolism
SJ2017_3769
09102 Energy metabolism
00190 Oxidative phosphorylation
SJ2017_3769
00720 Other carbon fixation pathways
SJ2017_3769
Enzymes [BR:
sja01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
SJ2017_3769
7. Translocases
7.1 Catalysing the translocation of protons
7.1.1 Linked to oxidoreductase reactions
7.1.1.12 succinate dehydrogenase (electrogenic, proton-motive force generating)
SJ2017_3769
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Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
GIDA
NAD_binding_8
DAO
Motif
Other DBs
NCBI-ProteinID:
ARD24007
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All DBs
Position
complement(4450010..4451998)
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AA seq
662 aa
AA seq
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MKIIYTDSLVVGAGLAGLRVAIASKERGLDTVVLSLIPAKRSHSAAAQGGMQASLGNTVK
GMGDDEDVHFQDTVKGSDWGCDQDVARMFAHCAPKAVRELANWGVPWSRITAGDRQVVVN
AEKVTITEAEKAHGLINARDFGGTKKWRTCYTADGTGHSLLYAVDNKAIEMDIPVHERIE
ALSLIHDGKRCHGVIARCLITGELRAYIGKATTIATGGYGRIYEVSTNAIICEGIGQALA
LDTGVAALGNMEAVQFHPTAIVPVGILTTEGCRGDGGLLRDKDGHRFMPDYEPEKKELAS
RDVVSRRMTEHMRKGKGVDSPYGPHLWLDITLLGRKHVETNLREVKEICENFLGIDPAKD
WIPVRPTQHYSMGGIRINATGESPQLAGLFSVGEAACWDMHGFNRLGGNSLAETVVGGMI
IGKYVADFCEKNTLEINTQVIDDTMSKLQGEIDELLVGEGTENVFDIKLAMQRIMMDYVG
IFRNGPELEKAVSELKDLLKRSKNIGLKCKKRHANPELVEALRVPRMLRVALTVACGANA
RTESRGAHAREDYPQRNDKEWLNRTLSTWPDENALEPELHYEQLDVMKMELPPGYRGYGN
DNAVAHPDTAAREAQIADILAKLGDDADRFDKQAAIMPFELPETLRPRNERLSDTSLVSG
EK
NT seq
1989 nt
NT seq
+upstream
nt +downstream
nt
gtgaaaataatttatacagactcattagtcgttggcgcaggccttgctggtttgcgcgtt
gctattgcttcaaaagaacgcggtttagataccgtggtgttatcgcttatccctgctaag
cgctctcactctgcagcggctcaaggtggcatgcaagcgagccttggtaacactgtaaaa
ggaatgggtgatgatgaagatgtccatttccaagatactgtaaaagggtctgattggggc
tgcgatcaagacgtagcaagaatgtttgcccattgcgcgccaaaagcggtgcgtgaactg
gctaactggggggtaccttggtcacgtattactgctggcgatcgccaagtggtagtgaat
gctgaaaaggtcacgattactgaagctgaaaaagcccatggcttaattaatgcccgtgat
tttggcgggactaaaaaatggcgtacttgctataccgctgacggtacaggtcattcattg
ttatatgcagtagataataaagccattgaaatggacattcctgttcatgaacgtattgaa
gctttatcacttatccatgatggcaaacgctgtcatggtgtgattgcacgctgtttaatt
acaggtgaattacgtgcctatattggcaaggcaaccactattgctactggcggctatggt
cgtatttacgaagtgtctaccaatgcaatcatctgtgaaggtataggccaagcattggca
ttagatacgggcgttgccgccttaggcaacatggaagcggtgcagttccacccaacagcc
attgtgccagtagggattttaaccacagaagggtgtcgtggtgatggcggcttattacgt
gataaagatggtcatcgctttatgcctgactatgagcctgaaaagaaagagctcgcatca
cgtgatgtggtatcacggcgcatgaccgagcatatgcgtaaaggtaaaggggttgatagc
ccttatggcccacacttatggctcgatattactctgcttggccgtaaacacgttgaaacc
aacttacgtgaagtcaaagagatttgtgaaaacttccttggtatcgaccctgcgaaagat
tggatcccagtcagaccgactcagcattactcaatgggcggtattcgtattaatgctacc
ggtgaaagtccgcagcttgcaggtttattcagtgtcggtgaggcagcctgttgggatatg
catggctttaaccgtttaggcggtaactcactagcagaaaccgtggttggcggcatgatt
atcggtaagtatgtggctgatttttgtgagaagaataccctagagattaatacacaagtc
atcgatgacaccatgtcaaaattacaaggcgaaattgatgagttattagtcggtgaaggt
actgaaaacgtatttgatatcaaactcgctatgcagcgcattatgatggattacgtgggt
attttccgtaatggccctgagcttgaaaaagccgtcagcgagttaaaagacttgcttaaa
cgcagtaaaaatattggccttaaatgtaaaaaacgtcacgctaatccagagcttgtcgaa
gcattaagagtcccgcgtatgctgcgagttgcgctaacggttgcatgtggtgctaatgcc
cgtacagaaagccgtggtgcccatgcccgtgaagattacccgcaacgtaacgataaagag
tggctaaaccgcacattatcaacgtggccagatgaaaatgcacttgagccagaactacat
tacgagcaacttgatgtgatgaagatggagttgccaccaggatatcgtggctatggtaat
gataatgccgtggcgcatcctgatactgcagcgcgtgaagcccaaattgccgatattctt
gccaaattaggtgatgatgccgaccgatttgacaaacaagcagccatcatgccttttgaa
ttacccgaaacattacgtcctcgtaatgaaagattaagtgacacaagccttgtgtcggga
gagaagtaa
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