KEGG   Shewanella japonica: SJ2017_3807
Entry
SJ2017_3807       CDS       T04959                                 
Name
(GenBank) ATP-dependent DNA helicase Rep
  KO
K03656  ATP-dependent DNA helicase Rep [EC:5.6.2.4]
Organism
sja  Shewanella japonica
Brite
KEGG Orthology (KO) [BR:sja00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:sja03400]
    SJ2017_3807
Enzymes [BR:sja01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     SJ2017_3807
DNA repair and recombination proteins [BR:sja03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    SJ2017_3807
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 UvrD_C_2 AAA_30 Viral_helicase1 ResIII
Other DBs
NCBI-ProteinID: ARD24043
UniProt: A0ABM6JPQ0
LinkDB
Position
complement(4516150..4518219)
AA seq 689 aa
MAFWYDRTPFILVIGKVVSMKLNPGQNDAVHYVSGPCLVLAGAGSGKTRVIINKIAYLVE
KCGYKARNIAAVTFTNKAAREMKERVAQSMGRKEARGLWISTFHTLGLEIIKREHKVVGL
KAGFSLFDDQDTFALLKELTEDELEEDKDLIKALAGAISNWKGDLVVPDVAIKRGGDEQT
QLFAKLYQRYAQHMKAYNALDFDDLILLPTLLLRHNEEVRTRWQTRIQYLLVDEYQDTNT
SQYELVKLLVGERARFTVVGDDDQSIYSWRGAKPQNLVLLGKDFPKLKLIKLEQNYRSSQ
RILRAANILIANNPHVYDKTLFSELAYGEPLRVLFAANEEQEAERVVAEIVRHKFVGKTK
FGDYAILYRGNHQSRLLERALMTNRIPYKLSGGTSFFARAEIKDIMAYLRLVVNPDDDNA
FLRVVNLPKRGIGPATLERLGNYANQKHISMFEAIFQAELNHHLAPAAMSSLYQFGKFIV
DTGEIATRGEPVDAIKQLIRKINYEDYLYETSTSAKAAEMRMKNISELYRWVTEMLEGDE
LDEPMTLPEVVTRLTLRDMMERNQEDEGGDQVQLMTLHASKGLEYPYVFMVGTEERILPH
QSSIDEDNVDEERRLAYVGITRAQKELWFTMCRERRQFGETMRCEPSRFLMELPQDDLIW
ENRKPKQTEQEKVQSAKANIANLRDMFKK
NT seq 2070 nt   +upstreamnt  +downstreamnt
gtggctttctggtatgatcgcactccgtttattttggttattggtaaagtcgtcagcatg
aagttaaatcctgggcaaaatgatgccgttcactatgtttctggaccttgtttagtatta
gcgggtgcaggcagtggtaaaactcgggtaattattaacaaaattgcatacttagttgaa
aagtgcggctataaagcacgcaatattgctgcggtgacttttactaataaagcggcacga
gagatgaaagagcgtgtggctcagtccatgggacgcaaagaagccagaggattatggatc
tcgacgttccatacattagggcttgagatcattaagcgtgaacataaagtggttggtcta
aaggctggcttttcattatttgatgatcaagatacctttgcgctgttaaaagagctgact
gaagatgaacttgaagaagacaaagatttaattaaagcgctagccggtgctatttcaaat
tggaaaggcgacttagtcgtgcctgatgtggcaattaaacgaggtggagatgagcaaaca
caattgtttgccaagctttatcaacgttatgcccaacatatgaaagcctataatgcgctt
gattttgatgatttgattttattgccaacgcttttattgcgtcataacgaagaagtcaga
acacgctggcaaacccgtattcaatacttgctagtcgatgaataccaagacacaaatacc
agtcaatatgagctagtgaagctgttagtgggtgaacgtgctcgctttaccgtggtaggg
gatgatgatcaatccatctattcatggcggggagcaaaaccgcagaacttagtcttactg
ggtaaagatttccctaaacttaaactgattaagttggagcaaaattaccgctcaagtcag
cggattttaagagcagccaacattctcattgctaacaacccccatgtgtacgataaaacg
ctgttcagtgaacttgcttatggtgagccactgcgtgtgttgtttgccgcgaatgaagag
caagaagctgagcgagtcgttgctgaaattgttcgtcataagtttgtcggcaaaactaaa
tttggtgattacgccatattatatcgaggaaatcaccagtctcgtttactcgaacgggca
ttgatgaccaaccgtatcccttataaattatctggtggcacatcatttttcgctcgggct
gaaattaaagatatcatggcatatttgcgtctggtcgttaatccagatgatgataatgcg
tttttacgtgtagtgaacttgcctaagcgtggaatcggcccagctaccttagagcgctta
ggcaactatgcgaaccaaaaacatatttcgatgtttgaagcgatttttcaagctgagctt
aatcaccatttagcgccagcggcgatgtcatctttgtatcaattcggaaaatttattgtc
gatactggagagatagcaactcgtggtgagccggtagatgcgatcaagcagttaattcgt
aaaattaattacgaagattacttgtacgaaaccagtaccagcgccaaagctgcagaaatg
cggatgaagaatatttctgagctttatcgttgggtgacggaaatgctggaaggtgatgag
cttgatgaaccgatgacgctacctgaggtggtaacacgtcttacgttgcgagacatgatg
gaacgaaaccaagaagatgaaggcggtgaccaagttcagttgatgacgttacacgcttca
aaggggttggaatatccctatgtctttatggtaggtactgaagaacgaattttgcctcat
caatcgagtattgatgaagataatgtcgatgaagaacgtcgtctcgcctatgtaggaatt
acacgtgcgcaaaaagagttgtggtttactatgtgccgtgaacgtcgtcagtttggtgag
actatgcgttgtgagccgagtcgcttcttaatggagttacctcaagacgatttgatttgg
gaaaaccgcaagcctaaacaaactgaacaagagaaggtgcaatctgctaaagcgaatatt
gctaacctaagagatatgtttaaaaagtaa

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