Shewanella japonica: SJ2017_3842
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Entry
SJ2017_3842 CDS
T04959
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
sja
Shewanella japonica
Brite
KEGG Orthology (KO) [BR:
sja00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sja02000
]
SJ2017_3842
Transporters [BR:
sja02000
]
Other transporters
Pores ion channels [TC:
1
]
SJ2017_3842
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
Motif
Other DBs
NCBI-ProteinID:
ARD24076
UniProt:
A0ABM6JRC3
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All DBs
Position
complement(4562751..4565789)
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AA seq
1012 aa
AA seq
DB search
MSTKLSKKTKPIHKIGKFKLSPIAKWMKLAAFTSVTSSFAFSAIAQEAETENLDKVDNDI
EVVVVTGTRKTIQDQISIKRESTTVVDGLSASDIGDLPALSIGEALETLTGASSHRENGG
ATEISIRGLGPFLSATNINGREATNGSGDRSVNFSQFPSELMQKVAIYKTQDASMIEGGV
AGVITLETLKPLDFGKQRFQAEVKGNYNPDQANVDNSLQGDLGYRGTLSYVDQFEFDNGQ
AFGLSVGLQRQDISQPEAEYRSSSPTGSSLWACLNDPTDTNTGFFRSSAGDCEDEIVGSN
NQGYNNDIDPDTGLAVDDGREYAWTGSSRSFRQNETSDERDALFFALQYQPSNKWDINFD
AQISDRTQAEARHDLIFLQKRVTPGVTGQNLITNDVGGILHWEGEERIESAGEQFSREEK
YRGYGLNVEHFFSDDLKISLDLGYSKTSREELQITNRGRTSSRPFLSWDLGEYIPHFTVT
DFDVTDISNFTDSLRTRIDRENVRDNEIMGARLDIDYILDSDFFSSVQAGVRVSELTFVQ
FGGTNGNGSRTTYNLDESATSAIDVLEGCQIAFPETDFLSSVSDGDIITHVDSSGNVVES
GTGASWATYNNECFSQAVAASQGGEFAYPDVTYENAGTIDVTEQTTSAYAMLNYDTEMFG
KYIRGNFGVRVVDTDVTSIGFREGFDVVTDPATGIVELVPNGSIEKIESGGDYTEVLPSF
NLVVDYDDNILLRAGIYRGMSRADPSDLSYSRTFVTDDSDDPESVEDLLVGVNGSGNPDL
QPLMSWNYDAAFEWYPSDDSMVALGVYYKQFNGGYQQQTQLENFIVDGVEVSLPITNSVT
TDENSDLYGFEATFSYRWDLGIGVKLGYNYADTTYEFEDSNYGNTYTTGLDGVVTQETVG
IVPPASVPGFSEHVFNGQVYYQIGGFDTALIYKYRSEYFQPYTSNGTRLRYVDEAGIWEA
RAAYKINQHLRIKVSAINLFSEPRSDDFYTQGNLGQVSDYGPRLFAGVSFKY
NT seq
3039 nt
NT seq
+upstream
nt +downstream
nt
atgtcgacgaagttaagtaaaaaaacaaaacccatccataaaatagggaagttcaagctt
tcacctatagcaaaatggatgaagcttgctgcatttacttctgtaaccagttcttttgca
ttttcggcaatagcacaagaagccgaaactgaaaatctagataaagttgataatgatata
gaagttgttgtcgttactggtacacgtaaaacaattcaagaccaaatttcaataaagcgt
gaatctaccacggttgttgacggtttatctgcttcagatattggtgatttacctgcactt
tcaattggtgaggcgctagaaacattaacgggggcatcatctcaccgtgaaaatggtggt
gctactgaaatcagtattcgtggtttaggtccattcttaagtgccactaacatcaatggc
cgtgaagcgaccaacggtagtggtgaccgttcagttaacttttctcagttcccatcagag
ttgatgcagaaagtcgctatttataaaacacaagacgcttccatgattgaaggtggggtt
gccggtgttattactctggagacacttaagcctttagattttggtaagcaacgttttcag
gctgaagtaaaaggtaactacaacccagaccaagcaaacgttgacaattcacttcaaggt
gatttgggctaccgtggaacactaagttatgttgatcaatttgagtttgataacggtcaa
gcatttggtttgagtgtaggtttgcagcgtcaagatattagccagccagaagctgaatat
agaagctcaagcccaacgggttcatctttgtgggcatgtttgaatgatccaaccgatacc
aataccggttttttccgtagctcagcgggcgattgtgaagatgaaattgttggctcaaat
aaccaaggttataataatgatattgatccagacacaggtcttgcagtagatgatggtaga
gaatacgcatggactggctcaagccgaagcttccgtcaaaatgaaacctctgatgaaaga
gacgctttattctttgctctacaataccaaccctcaaataaatgggatatcaattttgac
gcgcaaatttcagatcgtacccaagcagaagcgcgtcatgatttaattttcttacaaaag
cgcgttacaccgggtgtaacgggacaaaatctgatcacaaacgatgttggcggtattcta
cattgggaaggtgaagaacgcatcgagtctgcgggcgagcaattttcgcgtgaagaaaaa
tatcgtggatatggcttgaacgttgaacattttttctctgatgatctaaagattagtctt
gaccttggctattctaaaaccagccgtgaagaactacaaataacaaaccgaggaagaacg
agctctcgtcctttcttatcttgggatttaggtgaatatattcctcatttcacagtgact
gattttgatgtgactgatatttccaattttactgatagccttcgtactcgtatcgacaga
gaaaatgtccgcgacaacgaaattatgggtgcacgccttgatattgattatattctagac
agtgatttttttagtagcgttcaagctggcgttcgcgtttctgagttaacatttgttcaa
tttggtggcacgaacggtaatggctcaagaacgacatataatttagatgaatctgcaaca
tcggccatcgatgtacttgaaggttgccaaatagccttccctgagactgattttttatcc
agtgtttctgacggtgatattatcacccatgttgacagttcaggtaatgttgtagaaagc
ggtacaggcgcttcgtgggcaacttacaataacgagtgtttctctcaagcagtagcagca
tcacaaggcggcgaattcgcatacccagatgttacatacgagaatgcgggtactattgac
gtaacagaacaaactacctctgcttacgccatgcttaattacgacactgaaatgtttggt
aaatatattcgtggtaactttggtgttcgtgtagtggatactgacgttacctctattggc
tttcgagaaggtttcgacgttgtcactgatccggcgacaggtatcgtcgaattagtacca
aacggaagtattgaaaagattgaaagtggtggtgattacactgaagtactaccaagcttt
aacttagtcgttgattatgatgacaatattctcctaagggccggtatttaccgaggtatg
tcacgtgcagatccatctgatctaagttatagccgcacattcgtaaccgatgactcggat
gaccctgaatcagttgaagacttgttggttggtgttaatggttcaggtaaccctgatctt
caaccattaatgtcatggaactatgacgctgcttttgaatggtatccaagcgatgactct
atggtagcgctaggtgtttactataagcaattcaatggcggttaccaacagcaaacacag
ttagagaattttatcgttgacggtgtggaagtttctttacctattactaattcagtcact
actgacgaaaacagtgacctttatggtttcgaagcgacattctcgtatcgttgggattta
ggcattggtgtgaagcttggttataactacgccgatacaacctatgagtttgaagacagt
aactacggtaatacctatacgactggtttagatggtgttgttactcaggaaaccgtaggt
attgttcctcctgcttcagtacctggattttctgagcatgtattcaatggacaggtttac
taccaaataggcggttttgatactgctcttatctacaagtatcgtagtgaatacttccaa
ccatacacttctaacggcacaagactgcgttatgttgatgaggcaggtatttgggaagct
cgtgctgcttacaaaatcaatcaacaccttcgtattaaagtttcagcaattaacttgttc
agtgagcctcgcagtgatgacttctatacccaaggtaacttgggtcaagtaagtgattac
ggtcctcgcctgttcgcaggtgtcagctttaagtactag
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