Shewanella japonica: SJ2017_3926
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Entry
SJ2017_3926 CDS
T04959
Name
(GenBank) Ribosomal RNA small subunit methyltransferase I
KO
K07056
16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:
2.1.1.198
]
Organism
sja
Shewanella japonica
Brite
KEGG Orthology (KO) [BR:
sja00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sja03009
]
SJ2017_3926
Enzymes [BR:
sja01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.198 16S rRNA (cytidine1402-2'-O)-methyltransferase
SJ2017_3926
Ribosome biogenesis [BR:
sja03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
SJ2017_3926
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TP_methylase
RsmI_C
Motif
Other DBs
NCBI-ProteinID:
ARD24155
LinkDB
All DBs
Position
complement(4680453..4681295)
Genome browser
AA seq
280 aa
AA seq
DB search
MDLSVALYIVPTPIGNLGDISNRAIEVLNHVSLIACEDTRHSGKLLSHFGIETRKTALHD
HNERDRAQWIIQKLGNGEAVALISDAGTPLISDPGYHLVKQVREAGFNVIPLPGPCAAIT
ALSASGLPSDRFSFEGFLPSKEKGRLDKLAALKEDPRTLIFYESPHRIVHSLESIVTALG
GEREIVMAREVTKTFETFLSGPAADVLQNVKDDPNQQRGEIVLMCHGHRTEAESEFSTTV
INTLKILCQELPLKKAAALTGQIYDIKKNALYKHGLEIGL
NT seq
843 nt
NT seq
+upstream
nt +downstream
nt
atggacctatcggtcgcactttatatcgttcccactcctattggtaacttaggggatatt
agcaaccgcgcgattgaggtattaaatcatgtctcattaatcgcctgtgaagacacacgc
cacagcggaaaactattaagtcactttggcatagaaacacgtaaaacagccttgcatgac
cataacgaacgtgaccgagctcagtggattattcaaaaattaggtaacggcgaggccgtt
gcattaatttctgacgctggcacaccgctcatatccgatcctggttaccacttagttaaa
caagtgcgagaggcaggttttaatgtgatcccacttccaggtccttgtgctgcgataact
gcattaagtgcatcaggacttccgtcagatcgattttcatttgaaggttttttaccatca
aaagaaaaggggcgattagataaactggcagcgctcaaagaagatccgcgtacattaatt
ttttacgaatcaccgcatcgtattgtgcacagcttggaatcaatcgtgacagcattgggc
ggcgagcgtgaaattgtgatggcacgtgaagtcactaaaacattcgaaacatttttatcc
ggcccagcagccgatgtgttgcagaacgtcaaagatgatcctaatcagcagcgcggtgaa
attgtattaatgtgtcatggccatcgcacagaagccgagtcagagttttcaaccactgtc
ataaatacccttaaaattctttgccaagaattgcccttaaaaaaagcggcggcattaaca
gggcaaatttatgacattaagaaaaacgctctttataagcatggtttagaaatcggttta
taa
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