Shewanella japonica: SJ2017_3977
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Entry
SJ2017_3977 CDS
T04959
Name
(GenBank) Protein translocase subunit SecY
KO
K03076
preprotein translocase subunit SecY
Organism
sja
Shewanella japonica
Pathway
sja02024
Quorum sensing
sja03060
Protein export
sja03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
sja00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
SJ2017_3977
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
SJ2017_3977
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
SJ2017_3977
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
sja02044
]
SJ2017_3977
Secretion system [BR:
sja02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
SJ2017_3977
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SecY
Motif
Other DBs
NCBI-ProteinID:
ARD24206
UniProt:
A0ABN4YL85
LinkDB
All DBs
Position
complement(4736444..4737784)
Genome browser
AA seq
446 aa
AA seq
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MAKPGLDLKSAKGGLSELKTRLLFVIGAIIVFRAGSFVPIPGIDAAVLAELFAQQKDTIL
GMFNMFSGGALERASIFALGIMPYISASIIMQLLTVVHPALAELKKEGESGRKKISQYTR
YGTLVLGTLQSIGIATGLPSLVPGLVANVGFGFYFVAVVSLVTGTMFLMWLGEQITERGI
GNGISILIFAGIVAGLPSAIGQTAEQARQGDLNVLVLLLLAVIVFAVTYLVVFVERGQRR
IVVNYAKRQQGRKVFAAQSTHLPLKVNMAGVIPPIFASSIILFPGTLAQWFGQNESMSWL
SDFALAVSPGQPLYSLLYATAIVFFCFFYTALVFNPRETADNLKKSGAFIPGIRPGEQTS
RYIDKVMTRLTLAGAIYITFICLIPEFMLIAWKVQFYFGGTSLLIIVVVIMDFMAQVQTH
MMSHQYESVMKKANLVNKANLDRFGR
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaaccaggacttgatttaaaaagcgcgaaaggcggtttatcagaattgaaaact
cgtctcctgttcgtgattggtgcgattatcgtctttagagccggttcgtttgtgccaatt
cctggtattgacgcagctgtgttagcagagttgtttgctcaacaaaaagataccatccta
ggcatgtttaacatgttctcgggtggtgctttagagcgtgcttctatctttgctcttggt
atcatgccgtatatttcggcatcgattatcatgcagttattgactgtagttcatcctgcc
cttgctgaattgaaaaaagaaggcgagtcaggaagaaagaaaattagtcaatacacaaga
tacggaacgcttgtgttgggtacactccaatcaatcggtatcgcgacaggtttaccaagc
ctagtacctggcctagttgccaatgtaggatttggtttttactttgtagcagttgtcagc
ttagtaacaggaacgatgttcctaatgtggctaggtgaacaaattaccgagcgtggtatt
ggtaatggtatctcgatattaattttcgcaggtattgttgctggattaccttctgctatc
ggccaaacggctgaacaagctcgtcaaggtgatttgaatgtactggtactgttgttatta
gcggtaatcgtatttgctgtaacttatttggtagtatttgtagaacgtggtcaacgtcgt
atcgtcgttaactacgcaaagcgtcaacaaggccgtaaggtgtttgctgcgcaaagtaca
catttaccacttaaagttaatatggcgggtgtgattccaccaatttttgcatccagcata
attttgttcccaggcacactggctcagtggtttggacaaaatgagtctatgtcatggtta
agcgatttcgctttagctgtgtcaccaggacaaccgctgtattcattattgtatgcaaca
gctatcgttttcttctgtttcttctatactgcgttggtgtttaacccgcgtgagacagct
gataacttgaagaagagtggtgcgttcattcctgggattcgtcctggagaacagacttcg
cgttacattgataaagtaatgacccgcttgacattagcaggcgctatttacattaccttt
atctgcttaattccggagttcatgttaattgcgtggaaagtacagttctattttggcggt
acttcactactaattattgtagtcgtaatcatggacttcatggctcaggttcagacccat
atgatgtcacatcaatatgagtctgtgatgaagaaagctaacttagtaaacaaagcgaat
ttagatcgctttggacgctag
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