Shewanella japonica: SJ2017_4018
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Entry
SJ2017_4018 CDS
T04959
Name
(GenBank) tRNA/tmRNA (uracil-C(5))-methyltransferase
KO
K00557
tRNA (uracil-5-)-methyltransferase [EC:
2.1.1.35
]
Organism
sja
Shewanella japonica
Brite
KEGG Orthology (KO) [BR:
sja00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sja03016
]
SJ2017_4018
Enzymes [BR:
sja01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.35 tRNA (uracil54-C5)-methyltransferase
SJ2017_4018
Transfer RNA biogenesis [BR:
sja03016
]
Prokaryotic type
tRNA modification factors
Methyltransferases
SJ2017_4018
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_25
Methyltransf_15
Methyltransf_4
Cons_hypoth95
TRM5-TYW2_MTfase
PrmA
Methyltransf_11
MTS
Methyltransf_31
DREV
Methyltransf_12
Motif
Other DBs
NCBI-ProteinID:
ARD24246
UniProt:
A0ABN4YI77
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Position
4776809..4777906
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AA seq
365 aa
AA seq
DB search
MNLAAMDPKNYDAQLEQKRVKLEAAFAEFTPPSLEVFGSEPAHYRMRAEFRVWHDGDDLY
YYMFDKALNEKVRCEQYLPAGALINEMMTALMEELRPNHALRFKLFQVDFLSTLSGEILV
SLLYHRQLNDEWREEAELMKQRLSKKFNVNFIGRARKQKIDLDKDFVVESLTVNGKELQY
KQIENSFTQPNAKVSVKMLEWAISTTQNSTGDLLELYCGNGNFSIALAQNFERVLATELA
KPSVDAAQYNIAINDVDNLQIIRMSAEDFSDAMAKKRRYRRLEGIDLDSYNCNTIFVDPP
RAGIDDNTLSLMQNYDRILYISCNPDTLKANLTKLSETHKITRFALFDQFPYTDHMESGV
LLERK
NT seq
1098 nt
NT seq
+upstream
nt +downstream
nt
atgaatttagcagcaatggatcctaagaactatgatgcgcaactcgaacaaaaacgtgtc
aagcttgaagctgcgtttgctgagtttactccgccaagtttagaagtttttggatctgag
ccagctcactaccgtatgcgagcggaatttcgagtctggcatgatggtgacgacttatac
tattacatgtttgacaaagcattgaatgaaaaagttcgttgcgagcaatacttacccgct
ggagcgcttatcaatgagatgatgacagcattgatggaagaacttcgtccaaaccatgca
cttcgctttaaattattccaagtcgattttttatctactcttagtggcgagatcttagtc
tcacttctttatcatcgtcaattgaatgatgaatggcgagaagaagctgaactcatgaag
cagcgtctatctaaaaaatttaatgtgaattttatcggccgtgcccgcaaacaaaaaatt
gatttagataaagatttcgtggttgagtccttaactgtcaatggtaaagaattacagtat
aaacaaattgaaaatagctttactcaacctaatgctaaagtgtcagttaaaatgcttgaa
tgggctatttcaacgactcaaaatagtacgggtgatttattagagctttattgtggtaat
ggcaatttttcaattgcgttagcgcaaaactttgaacgtgtattagcaactgagctagca
aagccttctgtggacgctgcgcaatataacattgctataaatgatgtcgataaccttcaa
attatcagaatgtcagctgaagattttagtgatgcaatggctaaaaaacgtcgctatcgt
cgtttagaaggtatcgatttagacagttataactgtaataccatatttgttgacccaccg
cgtgcaggtattgacgacaatacgcttagcttaatgcaaaactatgaccgaattttgtat
atttcgtgcaaccctgacacgttgaaagcaaacttaaccaaactgagtgaaacacataaa
atcactcgatttgcactgttcgaccaattcccatataccgatcatatggaatcaggtgta
cttttagagcgtaaataa
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