Shewanella japonica: SJ2017_4089
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Entry
SJ2017_4089 CDS
T04959
Name
(GenBank) MscS mechanosensitive ion channel protein
KO
K16053
miniconductance mechanosensitive channel
Organism
sja
Shewanella japonica
Brite
KEGG Orthology (KO) [BR:
sja00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sja02000
]
SJ2017_4089
Transporters [BR:
sja02000
]
Other transporters
Pores ion channels [TC:
1
]
SJ2017_4089
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MS_channel_2nd
MS_channel_3rd
Motif
Other DBs
NCBI-ProteinID:
ARD24317
LinkDB
All DBs
Position
complement(4850659..4851927)
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AA seq
422 aa
AA seq
DB search
MDNELRSDIAAWLLEVGVNSQPSDGLATSILLFASLLIAAIAYYITRKVFVKAVNAMIRK
SAVTWDDIFMRYGVLEKLALLIPIMVLDLLIPIILTHQDLLGTIIDRAMSVLVVIFVIRA
IYSCLDAVNEIADVRQISRRLPVKSFVQLFKLFLFFIGFIISISVIADQSPIYFLSGLGV
ATGLVMLVFRDTILGFVAGIQLAANRMVSKGDWIQMDKYGADGAVDEVSLNTVKVRNWDN
TITMIPAYALVSDAFKNWRGMSEKGGRRIKRSLNIDVNSIHFLTEEDMTRLSKVNYLKDY
FPKMVSEINHANEQVSDIEMPVNGRRLTNVGTFRAYLDAYLKNNNKLHKDMTLMVRQLAP
TTQGLPIELYVFTNDTRWAFYEGIQADIFDHIFAILPEFGLKAFQNPTGEDIRSIKPESA
AH
NT seq
1269 nt
NT seq
+upstream
nt +downstream
nt
gtggataacgagttacgttcagatatcgccgcatggttattagaagttggggtaaatagc
cagccgtcagatggcctcgcaacctcaattttattgtttgctagtctactgattgcagcg
attgcgtattacattactcgcaaggtgtttgtgaaagcggtcaatgccatgatccgtaag
tcagcagtgacttgggatgatatctttatgcgctacggcgtattggagaagttagcgcta
ttgatacccataatggtattagatttgttgatacccattattctgactcaccaagacttg
cttggcactattattgaccgagccatgagtgttctcgtggttatttttgttatccgagct
atttattcatgccttgatgcagtgaatgaaattgccgatgtcagacaaattagtcgccga
ctaccggttaaaagtttcgtgcagctatttaaactgtttctcttctttattggttttatc
atttcaatctctgttattgcggatcagtcgccaatctatttcttgagtggtttaggtgtc
gctacaggtttagtgatgttggtatttagagataccattttagggtttgttgcaggtatt
cagcttgcagctaaccgcatggtgagtaaaggtgactggatccaaatggataaatacggc
gccgatggtgctgttgacgaggtctctttaaataccgtgaaggtgcgtaattgggataac
acgatcacgatgatcccagcttatgcattggtgtctgatgcgtttaaaaattggcgtgga
atgtcagaaaagggcggacgccgaatcaagcgctcactcaatatcgacgttaatagtatt
cactttttaaccgaagaagatatgacgcggttatctaaggtgaactacttaaaagactat
ttcccgaaaatggtgtctgaaattaaccatgcgaatgaacaagtgagcgatattgaaatg
ccagtgaatggcagacgattaaccaatgtcgggactttccgtgcttatttagatgcttac
cttaaaaataataataaacttcataaggatatgaccttaatggtgcgccaattagcgcca
acgactcaaggtttaccgattgagctgtatgtgtttaccaatgatactcgttgggcattt
tatgagggaatacaagcggatatatttgatcatatttttgctattctgccagaatttggc
ttgaaagcattccaaaatccgacaggtgaagatattcgcagcatcaagcctgaaagcgct
gcacattaa
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