Shewanella japonica: SJ2017_4099
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Entry
SJ2017_4099 CDS
T04959
Name
(GenBank) CMP deaminase
KO
K01493
dCMP deaminase [EC:
3.5.4.12
]
Organism
sja
Shewanella japonica
Pathway
sja00240
Pyrimidine metabolism
sja01100
Metabolic pathways
sja01232
Nucleotide metabolism
Brite
KEGG Orthology (KO) [BR:
sja00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
SJ2017_4099
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
sja02044
]
SJ2017_4099
Enzymes [BR:
sja01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.4 In cyclic amidines
3.5.4.12 dCMP deaminase
SJ2017_4099
Secretion system [BR:
sja02044
]
Type II secretion system
Competence-related DNA transformation transporter (DNA-T) core components
SJ2017_4099
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
dCMP_cyt_deam_1
MafB19-deam
Bd3614-deam
APOBEC3
HVO_2753_ZBP
Zn_ribbon_FGT1_1
Motif
Other DBs
NCBI-ProteinID:
ARD24327
LinkDB
All DBs
Position
complement(4863402..4863851)
Genome browser
AA seq
149 aa
AA seq
DB search
MISKWAKRFFQMAELVGSWSKDPSTQVGAVITKHNRIVSVGFNGYPHGISDSAETDDRDM
KLLKTLHAEENAILFAKRDLDGCDIWVTHFPCPNCAAKIIQTGITGVYCPEQSQDFLSRW
GDKIKISQDMFLQAGVKVNWLPVDALKDE
NT seq
450 nt
NT seq
+upstream
nt +downstream
nt
atgatttcaaaatgggcaaaacgattttttcagatggctgagcttgtaggatcatggagt
aaagatccgtcaactcaagtgggtgcggtgatcactaagcataatcgtattgtttctgtc
ggctttaatggttatccccatgggatttctgacagcgctgaaactgatgatcgtgatatg
aagttactcaagaccttgcacgcagaagagaatgcgattttatttgctaagcgtgatctt
gatggctgcgatatttgggtgacccatttcccgtgtcctaattgtgctgcaaagatcatt
caaacagggattactggggtatattgcccagagcaaagccaagatttcttatctcgctgg
ggcgataaaattaaaattagccaagatatgtttttgcaagcaggtgttaaagtgaattgg
ttacctgttgatgcattaaaagacgagtaa
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