Shewanella japonica: SJ2017_4200
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Entry
SJ2017_4200 CDS
T04959
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
sja
Shewanella japonica
Pathway
sja03030
DNA replication
sja03430
Mismatch repair
sja03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sja00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SJ2017_4200
03430 Mismatch repair
SJ2017_4200
03440 Homologous recombination
SJ2017_4200
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sja03032
]
SJ2017_4200
03400 DNA repair and recombination proteins [BR:
sja03400
]
SJ2017_4200
Enzymes [BR:
sja01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SJ2017_4200
DNA replication proteins [BR:
sja03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
SJ2017_4200
DNA repair and recombination proteins [BR:
sja03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
SJ2017_4200
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
RNase_H_2
DNA_pol_A_exo1
YxiG_2
Motif
Other DBs
NCBI-ProteinID:
ARD24427
UniProt:
A0ABM6JRA5
LinkDB
All DBs
Position
complement(4971114..4971719)
Genome browser
AA seq
201 aa
AA seq
DB search
MSANNVVVLDFETTGLSPDNGDRAIEIGAVKLVDGVVVDSFQELMNPGRRVSSFIENYTG
ISNQMLQTADDCETVMARFADFMGDFNLVAHNASFDKKFLDAEFNRINHQYSGQFACSLL
LSRRINQDAPNHKLGTLVDYHQLPNDGVFHRALADATMTGHLWLHQLETIKQYKPQQAIS
FEHIQMITGMPKAKVIAFLSQ
NT seq
606 nt
NT seq
+upstream
nt +downstream
nt
atgtcagcaaataatgtcgtcgttcttgatttcgaaaccacaggtttatcacccgataat
ggtgatagagccattgaaattggtgcagtaaaattagtagatggtgtcgtggttgactca
tttcaagaactgatgaaccctggccgacgggtaagtagtttcattgaaaactacacagga
attagcaatcaaatgctacaaactgctgatgattgcgaaacggtcatggcacgctttgca
gactttatgggcgactttaatctcgttgcgcataacgccagctttgataagaaattttta
gacgccgagttcaataggatcaatcatcaatactcaggtcaatttgcttgttctttactc
ttgtctcgtaggatcaatcaagatgctcctaatcataaactggggacattggttgattat
catcaattgccaaatgatggtgtttttcaccgagcattagcagatgcaaccatgacaggt
catttatggctccatcaacttgaaactattaagcaatataaacctcaacaagcgatctct
tttgagcatatccagatgataacaggcatgccaaaagctaaagttatcgcttttcttagc
caatag
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