Shewanella japonica: SJ2017_4201
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Entry
SJ2017_4201 CDS
T04959
Name
(GenBank) tRNA modification GTPase MnmE
KO
K03650
tRNA modification GTPase [EC:3.6.-.-]
Organism
sja
Shewanella japonica
Brite
KEGG Orthology (KO) [BR:
sja00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sja03016
]
SJ2017_4201
Transfer RNA biogenesis [BR:
sja03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
SJ2017_4201
Prokaryotic type
Methyltransferases
SJ2017_4201
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MnmE_helical
TrmE_N
MMR_HSR1
FeoB_N
RsgA_GTPase
Dynamin_N
AIG1
ABC_tran
Ras
AAA_28
Gtr1_RagA
Roc
MMR_HSR1_Xtn
DUF627
Arf
SRPRB
AAA_29
Motif
Other DBs
NCBI-ProteinID:
ARD24428
LinkDB
All DBs
Position
complement(4971726..4973084)
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AA seq
452 aa
AA seq
DB search
MTDTIVAQATAPGRGGVGIIRISGDKAADVAQQVLGHLPKTRYADYCDFKNAAGDVIDQG
IALFFKGPNSFTGEDVLELQGHGGQIVLDMLIKRVMEVDGLRIAKPGEFSEQAFMNDKLD
LTQAEAIADLIDATSEQAAKSALNSLQGEFSDEVHQLVEQVTNLRLYVEAAIDFPDEEVD
FLSDGKIANSLYNIIDKLDSVQASAKQGSIIREGMKVVIAGRPNAGKSSLLNALAGKESA
IVTEIAGTTRDVLREHIHLDGMPLHIIDTAGLRDTADTVEKIGIERAWDEIATADRVLFM
VDGTTTTDVNPHEIWPGFIDRLPAKLGVTVVRNKADLTGEPVMTTDEHGYNVYRISAKTG
LGVDELKQHLKSLMGYQSNLEGGFIARRRHLEALDLASNHLQLGKEQLEVYLAGELLAEE
LRMAQMALSEITGKFTSDDLLGKIFSSFCIGK
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atgacagacactatcgtggcacaagcaaccgcaccaggtcgtggcggtgtaggtatcatt
cgtatttcgggtgataaagccgctgatgtagcacaacaggtgttaggccatttacctaaa
acccgttatgccgattattgcgattttaaaaatgctgctggtgatgttattgaccaagga
attgctttgttctttaaagggcctaactcctttactggtgaagatgtattagagcttcaa
ggccatggtggtcaaatcgttttagacatgctcataaagcgtgtaatggaagtggatggt
cttcgcattgctaaaccaggtgagtttagtgagcaagcctttatgaatgacaagcttgat
ttaacccaagctgaagctatcgctgacttaattgatgccactagcgaacaagctgctaaa
agcgccttaaactcgctccaaggtgagttctcagatgaagtgcaccaacttgtcgaacaa
gtcactaacttgcgtttatacgtcgaagcagctattgacttccctgatgaagaagtcgac
ttcttatctgatggtaaaattgctaattcactttataacatcatcgacaaactggattca
gttcaagccagtgctaaacaaggctcgattatccgtgaaggaatgaaagttgtcattgca
ggacgtcctaatgcgggtaaatctagtctgttaaatgcccttgctggtaaagaatcagcc
attgtaaccgaaattgcgggtaccacacgtgatgtactgcgtgagcatatccacttagat
ggcatgccattgcatattatcgatactgcaggcttacgtgatacagccgatacagttgaa
aaaataggtatcgaacgtgcttgggatgaaatagccacagcagaccgagtgctatttatg
gttgatggcactacaaccacagacgtaaatccacatgaaatatggccaggttttatcgac
cgcctccccgctaaacttggcgttactgtggtgcgaaataaagccgacttaactggtgag
cctgtcatgacaactgatgagcacggctacaatgtttaccgtatttcagctaagacaggt
ttaggcgttgacgaacttaaacaacacctaaaatccttaatgggttatcaaagtaacctt
gaaggtggttttattgcccgtcgtcgtcatttagaggcattagatctcgcttcaaaccat
ttgcaattaggtaaagaacaacttgaagtttacttggcaggcgagttacttgcagaagaa
ctccgtatggcgcaaatggccttatcagaaatcacaggtaaatttacctccgatgatcta
ctcggtaaaatcttcagttcattctgtattggtaagtaa
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