Salimicrobium jeotgali: AAV35_005145
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Entry
AAV35_005145 CDS
T04359
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
sje
Salimicrobium jeotgali
Pathway
sje03410
Base excision repair
sje03430
Mismatch repair
sje03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sje00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
AAV35_005145
03430 Mismatch repair
AAV35_005145
03440 Homologous recombination
AAV35_005145
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sje03400
]
AAV35_005145
DNA repair and recombination proteins [BR:
sje03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
AAV35_005145
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
AAV35_005145
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
AAV35_005145
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ssDNA-exonuc_C
RecJ_OB
DHH
DHHA1
Motif
Other DBs
NCBI-ProteinID:
AKG04228
UniProt:
K2H964
LinkDB
All DBs
Position
1046028..1048328
Genome browser
AA seq
766 aa
AA seq
DB search
MLKSKMKWDFTYSSDSANRQELINELLEQRGLHTEEERNRFLHPALADLHDPFLINGMRK
AVNRVKEAIHYGEPILIFGDYDADGVSSTALMMECLRSLGAECDFYIPNRFTEGYGPNEN
AFRWASAQGYTLIITVDNGIAAVEEAKVAKELGIDLIITDHHEVQNELPEAFAILHPKTS
LQYPFQELAGVGVAFKFAHALLEEKPVHLLDLVAIGTVADLVPLEDENRILVSFGLEAIT
KTKRPGLRQLKNLNSIDGDVDEEAVGFMIGPRMNAVGRLQDASPAVDLLLTRDEEEAQEL
AGFVQELNKERQKIVQEIADEAETLLGEDVQDEVIVVAREGWNAGVLGIVASKLVRKFDR
PAIVLTIDKEKGQAKGSARSIDAYDMFENCMEHRDLFLHFGGHSQAAGMTLTEDNIVPLR
EELSRLAREKLAPEDYRQSLPVTMSLDLSEVSLQQIEFVNQLRPFGMANPKPYFHVRSKA
KELRLIGSKKNHMKVTLEQNGSRLDAIAFGQGDAYHSIAPQSPIDMVGQLSINEWNGTRK
PQLMVEDIAVKEWQLFDWRGTKHLQKSLPSFQKDEAACVTFGLQTEGPGELPVIGFNDSR
VKDYSTLILLDLPERLEDLHVLLGEVSPERIYAVYSLRDDAFMQTLPSREHFKYFYGMLK
KKKTFDLEKDSALLARHKGWKVDSIKFICNVFFDLGFVTIKDGQLFMNTQPEQKSLTESR
TFQTRQEQMEVEKVLYYSTYKELKDWMETRLQITGAEVKEEIGYGL
NT seq
2301 nt
NT seq
+upstream
nt +downstream
nt
atgttaaaaagtaaaatgaaatgggattttacatacagttcggattctgccaacaggcag
gagttgataaatgagttactggagcagcgcggcttgcatacggaagaggaaagaaacagg
tttttgcacccggcgcttgctgatttacatgaccctttcctcataaacggaatgcggaaa
gctgtgaaccgggtcaaagaggctatccactacggagagcccattctgattttcggggat
tatgacgcagatggtgtcagttcgacagcgttaatgatggagtgtctgcgatcgctcgga
gcggagtgtgacttttatattcctaacaggtttacggaaggatacggtccaaacgaaaat
gcattcagatgggcctccgcacagggatacacgcttataattacagtggacaacggtata
gccgctgtggaagaagcgaaagttgcaaaagaattggggatcgatctcattattacggat
caccacgaagtccagaacgaactgccggaggcatttgcgattctgcatccgaaaacgtct
ctccagtatccttttcaggaactggcaggggtcggggtggcgttcaaattcgcccacgct
cttctggaagagaagccggttcacctgcttgatcttgtagctataggaacggtcgccgac
ctggtgccacttgaagatgagaacaggatacttgtttccttcggacttgaggctattaca
aagacgaagcgcccggggctccgtcagctgaaaaatttgaatagcatagacggagacgta
gatgaagaagcggtcggatttatgataggtccaagaatgaacgcagtcggccgcctgcag
gatgcttctcctgccgtggatcttttacttaccagggatgaagaagaggcacaggaactg
gccgggttcgttcaggaactgaataaagagcgtcagaaaatcgttcaggaaatagctgac
gaagccgagacactgctcggggaagacgtgcaagatgaagtgattgtggtggccagggaa
ggctggaacgccggagtgcttggcatcgtcgcttccaagcttgtgaggaaattcgacagg
cctgcaattgttcttaccattgataaggagaaaggtcaggcgaaagggtccgccagaagt
atagatgcctatgacatgttcgaaaattgcatggagcacagggatctgtttcttcacttc
ggcgggcattcccaggctgcaggtatgacactgacggaggacaatatagttccgctgaga
gaagagttgtcccgacttgcgagagaaaaactggcgccggaggactaccgtcagtcatta
cctgtcacgatgagtctcgatctcagtgaagtgtcattacagcagatagaattcgtcaat
cagctgcggccattcggaatggctaatccgaaaccgtatttccacgtcagaagcaaagcg
aaggaattgaggctgataggcagcaaaaagaatcatatgaaagtaacgctggagcagaac
ggctcccgtctcgacgctatcgcgttcggacagggagacgcatatcactcgatcgctcct
cagtctccgatagatatggtagggcagctgagtatcaacgagtggaacggaacgaggaaa
ccacagctgatggtggaagacattgcagtgaaagagtggcagctgttcgactggagagga
acgaaacatttgcagaagtctttaccttccttccagaaagacgaagccgcctgtgtcact
ttcgggttgcagacggaaggacccggagagttaccggtgatcgggttcaacgacagcagg
gtcaaagattacagtaccttgattttactcgatctccccgaacggcttgaagatctgcat
gtgctcctcggggaggtatcacctgagcgtatttacgccgtctactctttgagagacgat
gcgttcatgcagacgctgccgtcccgggaacatttcaagtacttttatggaatgctgaag
aagaagaaaacgtttgaccttgaaaaagattcggctcttctcgcaagacacaagggatgg
aaagtcgattcgataaaattcatttgtaacgtgttttttgatttgggttttgttacaata
aaagatggtcaattgtttatgaacacacaacccgaacagaaaagcctgacagaatcccgg
acgttccagacgagacaggaacagatggaagttgaaaaagtactatactattcgacatat
aaagaattgaaagattggatggaaacccggctgcaaattacaggggcggaagtcaaggag
gaaataggatatggattataa
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