Salimicrobium jeotgali: AAV35_006860
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Entry
AAV35_006860 CDS
T04359
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
sje
Salimicrobium jeotgali
Pathway
sje03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sje00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AAV35_006860
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sje03019
]
AAV35_006860
03016 Transfer RNA biogenesis [BR:
sje03016
]
AAV35_006860
Enzymes [BR:
sje01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
AAV35_006860
Messenger RNA biogenesis [BR:
sje03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
AAV35_006860
Transfer RNA biogenesis [BR:
sje03016
]
Prokaryotic type
tRNA degradation factors
AAV35_006860
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
KH-I_KHDC4-BBP
S1_RRP5
OB_RRP5_4th
SPATA25
S1_2
Motif
Other DBs
NCBI-ProteinID:
AKG04538
UniProt:
K2GQU8
LinkDB
All DBs
Position
complement(1382416..1384548)
Genome browser
AA seq
710 aa
AA seq
DB search
MTDNKQVFSIDIGGQKLSVEIGEMAKQANGAAMISYGDTSVLSTATGSKEPKDLPFFPLT
INYEERLYAVGKIPGGFIKREGRPSDKAVLTARLIDRPIRPLFPDGFRNDIQVINTVMSV
DQDCSSEIAAMIGSSIALSVSDLPFAGPIAGVIVGRVDGKFVINPTVEQQKASDIDLTVA
GTKDAVNMVEAGALEVPEADMLEAIMFGHEEIKRLVEFQEEIIKAAGKEKMEVQLLSNDE
QLQQKTEREATASIVEAIQINDKKAREEAIDKAKNDYLDKVAEEELEEEEISQIKSILDD
IVKAEVRRLITKEKIRPDGRSPREIRPLTSRVDVLPRTHGSGMFTRGQTQALSVCTLGAL
GEVQILDGLDLEESKRFMHHYNFPNFSVGETGPIRGPGRREIGHGALGERALEVVIPSEE
EFPYTIRLVSEVLESNGSTSQASICASTLAMMDAGVPIKAPVAGIAMGLVKSGDDYTILT
DIQGMEDFLGDMDFKVAGTEKGVTALQMDIKIEGLSRDILKEALEQAKKGRMDILGHMLE
VMPSTRSELSSYAPKIMKMSINPDKIRDVIGPSGKQINKIIEETGVKIDIEQDGTVFISS
QNSEMNENAKKVIEDIVRDVEVGEVYDGTVKRVEKFGAFVELFKGKEGLVHISELAEEHI
KKTEDVANVGDTLTVKVKEIDRQGRINLSRKAILVEQKEKEQSEEGQQTE
NT seq
2133 nt
NT seq
+upstream
nt +downstream
nt
atgacagataataaacaagtgttttctattgatatcggcggtcagaagctgtcggtggaa
ataggtgaaatggcaaagcaggcgaatggagcagcgatgatcagctatggtgatacatcg
gttctttccacagcgaccggttccaaagagccgaaagaccttccgtttttcccgttgact
attaactatgaagaacgtctatatgccgtagggaaaataccgggcggtttcattaagcgc
gaagggcgtccgagcgacaaagcggttttgactgctcgtttgattgatcgcccgatcaga
ccgctgttcccggacggattccggaacgatatccaggttatcaacactgtgatgagtgta
gatcaggactgttcctccgaaatcgcagcgatgataggttcttctattgcactcagtgtc
tccgatctcccgttcgcgggaccgatcgccggggttatcgtcggacgggtggacggaaaa
ttcgtcatcaacccgaccgtcgaacagcagaaagcgagtgacatcgatttaacagtggcc
ggaacgaaagacgctgtcaacatggtagaggcaggagcacttgaagttccggaagcggat
atgcttgaagcgataatgttcgggcatgaagagattaaacgcctggtggaatttcaggaa
gagatcattaaagctgccggaaaagaaaaaatggaagtgcaacttctttcaaatgatgaa
cagcttcaacagaagacggaaagggaagctacggcttccatagtcgaagctatccagatt
aatgataaaaaagcgcgggaagaagcgatcgataaggctaagaacgactacctggataaa
gtcgccgaagaggaattggaagaagaagagattagtcagatcaagtccatccttgacgat
attgtaaaagccgaggtacgcaggctgattacaaaagagaaaataagacctgacggcaga
agtccgcgtgaaatccgacctcttacctcaagagtggatgtgctgccacgtacacacggg
tcggggatgttcacccgtggtcagacccaggcgctcagcgtatgtacacttggggcactg
ggtgaagtccagattctggatggcctggacctggaagaatcaaaacgcttcatgcaccat
tacaattttccgaacttctccgtcggtgaaacaggaccgatacgcggtccgggccgtcgt
gaaatcggccacggagctttgggggaaagagcgcttgaagtggtcattccatccgaagag
gaatttccgtacactatacggctcgtttccgaagtgcttgaatccaacggttccacttcc
caggccagtatatgtgccagtactcttgcaatgatggatgccggtgtgccgatcaaagca
cccgtagccggtatcgccatgggccttgtgaaatcaggggacgattatacgattctgaca
gatattcagggaatggaagactttctcggagatatggattttaaagtagccggtaccgaa
aagggtgtcactgccctgcagatggacattaagattgaaggtctttcaagagatattttg
aaagaggcgctggaacaggcgaaaaaaggaagaatggacatactcggtcacatgcttgaa
gtaatgccttccacacgcagtgaactgtcctcctacgctcctaaaattatgaaaatgtcg
atcaaccctgataaaattcgtgatgtcattggtccgagcggtaaacagatcaataaaatc
atcgaagaaacaggagtgaaaatcgatattgagcaggatggaactgttttcatttcctct
caaaacagtgaaatgaatgaaaacgccaaaaaagtgatcgaagatatcgttcgtgacgta
gaagtgggagaagtatatgatggtacagtgaaacgggtggagaaattcggagccttcgtg
gaactgttcaaaggcaaagaaggcctcgtacacatctccgagctggcggaagaacacatt
aaaaaaactgaagacgtagccaatgtaggggatacgctgacagtaaaagtgaaagagatc
gacagacagggacggataaacctttccagaaaagcgatccttgtggaacagaaagaaaaa
gagcagagtgaagaaggacagcagacggagtaa
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