Salimicrobium jeotgali: AAV35_007125
Help
Entry
AAV35_007125 CDS
T04359
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
sje
Salimicrobium jeotgali
Brite
KEGG Orthology (KO) [BR:
sje00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sje03032
]
AAV35_007125
03400 DNA repair and recombination proteins [BR:
sje03400
]
AAV35_007125
Enzymes [BR:
sje01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
AAV35_007125
DNA replication proteins [BR:
sje03032
]
Prokaryotic type
DNA Topoisomerases
AAV35_007125
DNA repair and recombination proteins [BR:
sje03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
AAV35_007125
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Zn_ribbon_RPB9
Toprim_4
Toprim_3
Toprim_2
Motif
Other DBs
NCBI-ProteinID:
AKG04586
UniProt:
K2GEZ6
LinkDB
All DBs
Position
complement(1431733..1433817)
Genome browser
AA seq
694 aa
AA seq
DB search
MADYLVIVESPAKAKTIERYLGKKYKVKASLGHVRDLPKSQMGVDVEAEDFSPKYITIRG
KGPVLKELKTAAKKAKKVYLAADPDREGEAIAWHLAHALNIDGGSECRVVFNEITKDAVK
ESFKNPRTINEDLVKAQQARRILDRLVGYNISPILWKKVKKGLSAGRVQSVAVKLIIDRE
KEINNFTPEEYWSIEGNFKKGKESFEGSFYGLDGKKQNLNSEEDVTAITKRLQGDKFEVQ
KVNKRERRKNPASPFTTSSLQQEAARKLNFRAKKTMMLAQQLYEGVDLGGKQGTAGLITY
MRTDSTRISETAKSEALDYIVEEFGEEFSASEKKKEKKKEGAQDAHEAIRPTSTLKEPSS
LKKILSRDQYRLYKLIWERFVASQMAPAVMDTMTVHLYNEGVEFRATGSDIKFKGFMKVY
VEGEDDSSKDKNKQLPHLEEGMTVEAETVEPSQHFTQPPPRYTEARLVRTLEELGIGRPS
TFAPTLDTIQRRGYVSLDNKRFIPTELGEIVLEQLLAYFPEILDVEFTKKMEDDLDSIED
GEEDWIRVLREFYKGFEPRLTTAEKEMEEIEIKDEPAGSACEKCGHEMVYKMGRYGQFLA
CSNFPDCRNTKPILKKIDVTCPKCEKGEIVERKSKKNRKFYGCERYPDCDFISWDKPISR
PCPKCESLLVEKRLKKGNQIQCTECDYKEELQEK
NT seq
2085 nt
NT seq
+upstream
nt +downstream
nt
atggcagactatctggtaatcgtcgaatcacctgctaaagctaaaacaattgaaaggtat
ctgggcaagaaatataaagtgaaagcatctctcggacacgtccgtgatctgccgaagagt
cagatgggggtagatgtggaagcggaagatttcagcccgaaatatataacgatacgcggc
aaaggacccgtattgaaagaacttaaaactgctgcaaaaaaagcgaaaaaagtatatctg
gctgccgaccccgaccgtgaaggagaggcgatcgcctggcacttggcccacgctcttaat
atagacgggggaagtgagtgccgggttgtgtttaatgagatcacgaaagatgccgtcaag
gaatctttcaaaaatccgaggaccatcaacgaagatcttgtaaaagcacaacaggcgcgt
cgtattcttgaccgtctcgtcggttacaacatcagtccgattttatggaagaaagttaaa
aaaggtctcagtgccggacgggtgcagtcggttgctgtgaaactgatcatcgaccgggaa
aaagaaataaataatttcacacccgaagaatactggtccattgaagggaacttcaaaaaa
ggtaaagaatcgttcgaaggttccttttacggattagatggcaaaaaacagaatttaaat
tccgaagaagacgtcacagccattacgaagcgtcttcagggagacaaattcgaagtacag
aaagtgaataaaagggaaagaagaaaaaatccggcctccccgttcactacgtcatcactt
cagcaggaagctgcaaggaaactcaatttccgggcgaagaaaacgatgatgcttgcccag
cagctctatgaaggtgtcgaccttggaggaaaacaggggacggcaggtcttattacgtat
atgcgtaccgactccacccgtatttccgaaacggccaaatcggaagcgctcgattacatt
gtggaagaattcggggaggagttcagcgcatcagagaaaaagaaggaaaagaaaaaagaa
ggagcccaggacgctcacgaagctattcgtcccacttccacgctgaaagaaccttcttct
cttaaaaagatcctttcgagagatcagtaccgattatataaactgatctgggaacgtttc
gtagccagccagatggcccctgctgtcatggatacgatgacggttcatttgtataatgaa
ggagtggaattcagagcaacgggatcggatattaaatttaaaggtttcatgaaagtgtac
gtagagggagaagatgatagcagtaaagataagaataaacagctgcctcacctcgaggaa
gggatgacggtcgaagcagaaactgtcgaacccagccagcattttacacaaccgcctccg
aggtatacggaggcaaggctcgtacgtacgcttgaggaactcggtataggccgtccgtcc
acttttgctcctacgctggatacgatacagcgaagaggctacgtgtctctcgacaataaa
cggtttattcctacagagcttggagaaatagtgctggagcagctgctcgcatattttccg
gaaatcctcgatgtggaattcacgaagaagatggaggatgatctggacagtattgaagac
ggggaggaagactggatacgcgttctccgggagttctacaaaggattcgaacccagactg
actactgctgagaaagaaatggaagaaatcgagataaaagatgaaccggcagggagcgcc
tgtgaaaaatgcggtcacgaaatggtctacaagatggggagatacggtcagttcctcgcc
tgttccaacttccctgactgcagaaatacaaagcctattctgaagaaaatagatgtcact
tgccctaagtgtgaaaagggagagattgtagaaagaaaaagtaagaagaacaggaaattt
tatggctgtgaacgataccctgattgtgatttcatttcctgggacaaaccgatcagcagg
ccatgtccgaaatgtgagtcccttctcgtagagaaaagactgaaaaagggtaatcagata
cagtgtacggaatgtgattacaaagaggaacttcaggaaaaatga
DBGET
integrated database retrieval system
