KEGG   Salimicrobium jeotgali: AAV35_008355
Entry
AAV35_008355      CDS       T04359                                 
Name
(GenBank) type I-C CRISPR-associated protein Cas8c/Csd1
  KO
K19117  CRISPR-associated protein Csd1
Organism
sje  Salimicrobium jeotgali
Brite
KEGG Orthology (KO) [BR:sje00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:sje02048]
    AAV35_008355
Prokaryotic defense system [BR:sje02048]
 CRISPR-Cas system
  Type I CRISPR-Cas system
   Subtype I-C factors
    AAV35_008355
SSDB
Motif
Pfam: Cas_Csd1
Other DBs
NCBI-ProteinID: AKG04810
UniProt: K2GJC4
LinkDB
Position
complement(1677627..1679513)
AA seq 628 aa
MNWLKQLYETYEENKQEIGEIKIRDNGQEYTLLPIAHTTQNAHIEVYVTSEGRFHSAYVI
DKEDTGTTIPTTEDSANRAGAKVAPYPLHDKLVYVAGDYSDYTGENKTENFNAYIKQLEE
WANSLYTHEDVKSVYEYLKNATLISDLIMEDILHEDSSGKLLKKWSKEMEEERGPKPDIF
KVLPGDQQAAFIRFRIHDPVKEHKPIWKNKNVFNAYVNFYESQFEEEDLCFVLGKRLPKT
TKHASKIRNAADKAKLISANDTSGFTFRGRFTDSEQVAGISYEASQKAHNALKWLIRRQG
TAIGERVFLVWGQKNPDAPDLRNDSLSLTPDIKFNNEVVTKEGYAKEFSKALKGYRHNLP
PEENVNIIILDAATTGRLGVLYYKTLIIDDYLDRLRNWHTTTVWKQSIKREKEKIYFFGA
PSLKDIAYAAYGFSADDKIIRDTIERLIPSIIDQRPVPTDLARQTFQRASSPESMQQWMW
EKTLGVSCALINNSLSKKGEGKDLAIEYDNEDRSYLFGRLLASADVLERRAHGADENRPT
NAIRYMSAFSKHPARTWKVIREQLLPYQQRLGRQGIDVLRVMESVESTMHSTQYNDQPLT
GLYLLGFSSQREELFKSKKDKEGEMTNE
NT seq 1887 nt   +upstreamnt  +downstreamnt
atgaattggttaaaacagttatatgaaacgtacgaagaaaataagcaggaaatcggtgaa
atcaaaataagggacaatggccaagaatatacattgctccctatcgcccacactacgcaa
aatgctcatatcgaagtgtacgttacatctgagggaagatttcacagtgcctacgtaatt
gataaagaggatacaggaaccacaattccaaccactgaggattctgccaatcgtgccggg
gctaaagtggcaccataccccttacatgacaaacttgtatatgttgctggagattattcc
gattacacaggtgaaaataaaacagagaacttcaatgcatatattaaacaattagaggaa
tgggcgaactcgctttacacacatgaagacgttaagagtgtatatgaatatttaaagaat
gctacgctgattagtgatttgataatggaagatattcttcatgaagatagttcgggaaag
ctgttaaagaagtggtcgaaagagatggaggaagaaagagggccgaaaccggatattttc
aaagttttacccggtgatcaacaggcggcatttattcgatttagaattcatgaccccgta
aaagagcataaacctatttggaaaaacaaaaatgtgtttaatgcctatgtaaatttttat
gaatcacagtttgaagaagaggacttatgttttgtgctcggtaaacgtcttccaaaaaca
acaaaacatgccagtaaaatcagaaatgccgcagataaagcgaaattgatttctgcaaat
gacactagtggtttcactttcagggggagattcacagatagcgaacaagtagcaggaatc
agctatgaagcatctcagaaagcacacaacgcattgaagtggctgattcgacgtcaagga
acggcaataggtgagcgcgtgtttctagtttggggtcagaagaatccggatgcccctgat
ttacgaaatgacagtctttccctaacaccggatattaagtttaataacgaggtggttacc
aaggagggatatgcaaaagaattttcaaaggcattaaaaggctatagacacaacctgcct
ccggaagagaatgtgaatattatcatattagatgcagctaccactggaaggttaggggtt
ctctattacaaaactcttataatcgatgactatcttgatagattaaggaactggcatact
actactgtatggaagcaatcgatcaaaagggagaaagaaaaaatatattttttcggagcg
ccctcgttaaaagacatagcttatgcagcctatggattttctgcggatgacaaaataatt
agagacacgatagaacggttgattccgagtattatagatcagaggcccgtaccgacggac
ctggctcggcaaactttccaaagagcgtctagccctgaatctatgcaacagtggatgtgg
gaaaaaacattgggcgtttcctgtgctttaattaacaattcactatcgaaaaaaggggag
gggaaagatttggctatagaatatgataatgaggatcgcagctatttatttggaagactt
cttgcttctgcagatgtattggaaagacgagcacacggggctgatgaaaatcgtcctaca
aatgctatacgctacatgagcgcattttctaaacatccggcaagaacctggaaagtgatt
cgggagcaactcttgccttaccagcaaaggttaggcaggcaggggatagatgtattaaga
gttatggagtcggtagaatccactatgcattctacacaatataatgaccaaccattaaca
ggcttgtatttattaggtttttcatcacagcgggaagaactttttaaatctaaaaaagac
aaagaaggggaaatgactaatgagtaa

DBGET integrated database retrieval system