Salimicrobium jeotgali: AAV35_008860
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Entry
AAV35_008860 CDS
T04359
Name
(GenBank) 23S rRNA (uracil-5-)-methyltransferase RumA
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
sje
Salimicrobium jeotgali
Brite
KEGG Orthology (KO) [BR:
sje00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sje03009
]
AAV35_008860
Enzymes [BR:
sje01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
AAV35_008860
Ribosome biogenesis [BR:
sje03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
AAV35_008860
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
Cons_hypoth95
MTS
Methyltransf_25
Methyltransf_15
TRM5-TYW2_MTfase
N6_N4_Mtase
PrmA
Methyltransf_4
TRAM
TRM
UPF0020
Methyltr_RsmB-F
Methyltransf_11
PCMT
Methyltransf_32
Motif
Other DBs
NCBI-ProteinID:
AKG04902
UniProt:
K2GB83
LinkDB
All DBs
Position
complement(1785799..1787211)
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AA seq
470 aa
AA seq
DB search
MAKNKKKNRKKPHNRPAPSGKPHSLKQEQPKTTEVTCTGLTDDGKGIATWKGKRLEIPHL
LPGEKAEVAVPKRGPAEVVRVTEKSEVRQEAPCPYFYVCGGCQIQHMTPLAQNDFKQSIV
DRLMQPFGKPERIMTMDHPFDYRNKNTMTFGENRKRQIIGGLYAANSHDLIEIDRCLIHD
PKADAIIATIKELLVSFKLRAYNEDTNRGFLRHVLIKTGKTSGEVMVVLVTGTPEFKGKN
NFLKALRRDHPEISTIIQNINTRSDSMVLGKQEKVLFGKGYITDTIGGMEFEISAKSFYQ
INPVQTEKLYGKAVELAGLTGKETVIDAYCGIGTIGLLASKQAGKVIGVEMNKGAVKDAI
RNSRHNKVTNARFYEGDAGNFMMKMAAEGKKADVVILDPPRSGSDEAFLSSVVKLGPERV
VYVSCNPETQVRDLHYLKKHGYKVQEIHPVDMFPQTYHVETAVLLEKSGR
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
ttggctaaaaataaaaagaagaatcggaagaaacctcataacagaccggccccttccgga
aaaccgcattcattgaaacaggagcagcctaaaacgacggaagtgacctgtacaggactt
acggacgatggaaaagggatagcgacgtggaagggaaaacgtctcgagattccgcacctc
cttccgggtgaaaaagcggaagtggccgttccaaagcgaggaccggctgaagtcgtccgg
gtgacagaaaagagcgaagtgagacaggaggctccctgcccttacttttacgtgtgtggc
gggtgtcagatacaacatatgactccgcttgcccagaatgattttaaacaaagtatagtc
gaccggcttatgcagccgttcgggaagcctgagcggattatgactatggaccaccctttt
gattatcgcaataaaaatacgatgactttcggtgaaaacaggaaacgtcagattattgga
ggactgtacgcggccaactctcatgatctgatcgaaatcgatcgttgtctgatccacgat
ccgaaagcggacgccatcattgccaccatcaaggaactgctggtctcttttaaacttcgg
gcctataatgaagatacaaatcgggggtttctccgtcacgtactgataaaaacaggtaaa
acaagcggagaagtgatggtggtactcgtcaccggcactcccgaattcaaagggaagaat
aatttcctcaaagctcttcggcgtgatcatccggaaatttcaacgattatccagaatatc
aatacgcgcagcgacagcatggtacttggtaaacaggaaaaagttctgttcggtaaaggg
tatatcacggatacaatcggaggtatggagtttgaaatctctgcgaaatctttttaccag
atcaacccggtacagacggagaaactgtatggaaaagcagtggaacttgccggtttgacc
gggaaggagacggtgatcgatgcctactgcggcatcggcactatcggattgcttgccagc
aaacaggcgggtaaagtgatcggagtagagatgaataaaggagcagtcaaagatgccatc
cgcaattccaggcacaataaagtgaccaacgcccgcttttacgagggagatgccgggaat
tttatgatgaaaatggctgcggaaggcaaaaaagcggacgtagttattcttgatcccccg
cgaagcggcagtgatgaggcttttctgtcgagcgtcgtgaaactcggacctgagcgggta
gtgtatgtttcgtgtaacccggaaactcaggtgagagatcttcattatttgaagaaacac
gggtataaagtacaggagatccacccggtggatatgtttcctcagacttatcatgtggag
acggcagtgctgttggagaaaagtggccgataa
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