Salimicrobium jeotgali: AAV35_009535
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Entry
AAV35_009535 CDS
T04359
Name
(GenBank) 3'-5' exoribonuclease YhaM
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
sje
Salimicrobium jeotgali
Brite
KEGG Orthology (KO) [BR:
sje00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sje03019
]
AAV35_009535
Messenger RNA biogenesis [BR:
sje03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
AAV35_009535
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
HD
tRNA_anti-codon
TraI_2
Cas3_HD
Motif
Other DBs
NCBI-ProteinID:
AKG05019
UniProt:
K2G675
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All DBs
Position
complement(1927500..1928447)
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AA seq
315 aa
AA seq
DB search
MSKGIAHYQVGETFDDFLLITSANKSIASNGKPFLALLLRDRTGEIDARLWGAKKEDETL
FKKGVLVKVSGEISQFRNKPQLKIQHIRQALEEDGREVKQFVEEAPVSVEWLEDQIKEFM
FEMTNANLQRLTRYFVKEYNEELFTYPAATRNHHNYVSGLAHHVVTMLRLAREIGGIYPE
VNKDLLYAGIIVHDLGKIRELSDPDSPEYTIEGRLLGHISIMVEEIQHAASELHIEGEEV
MALKHLVLSHHGKGEWGSPKPPYIREAEILHQIDMLDSRIQMMNTSLQKTKPGSFTERIY
PLEQRSFYKPLFEME
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgagtaagggaattgctcattatcaggtaggggagacgttcgacgatttcctgctcatc
acctcggcgaataaaagtatcgccagtaacggtaaaccgtttttagccctgcttttacgt
gaccgtaccggggaaatcgacgcccggttgtggggcgcaaaaaaagaagatgagacattg
tttaaaaaaggtgtattagtgaaggtatccggggagataagtcaattcagaaataagccc
caattgaaaattcagcacatacgtcaggcgctggaggaagacggaagagaagtgaaacaa
ttcgtggaggaagcgccggtgagtgtagagtggcttgaagatcagatcaaagaattcatg
ttcgaaatgaccaacgctaatcttcagcggctcacccgctacttcgtaaaagagtacaac
gaagaacttttcacatatcctgccgctacgaggaaccaccataactacgtttcaggcctt
gctcaccatgttgtcaccatgctccgcctagccagggaaatcggtggaatttacccggaa
gtaaacaaggatttactgtacgccggaattatcgtacacgatctaggtaaaataagagag
ctttcggaccctgattcacccgagtatacgattgaaggccgtttgctcgggcacatttcc
ataatggtcgaggaaatccagcatgcggcctcggaacttcatatcgaaggggaggaagtg
atggcgctgaagcatcttgtactgagtcatcacggtaaaggtgaatggggcagcccgaaa
ccaccttacattcgcgaagcagaaattctgcaccagatcgatatgctggactcccgcata
caaatgatgaacacctccctgcaaaagacaaagccaggcagctttacggagaggatttat
ccgctggagcagcgctctttttacaaacccctgtttgaaatggagtga
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