Salimicrobium jeotgali: AAV35_012945
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Entry
AAV35_012945 CDS
T04359
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
sje
Salimicrobium jeotgali
Pathway
sje03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
sje00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
AAV35_012945
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sje03021
]
AAV35_012945
03400 DNA repair and recombination proteins [BR:
sje03400
]
AAV35_012945
Enzymes [BR:
sje01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
AAV35_012945
Transcription machinery [BR:
sje03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
AAV35_012945
DNA repair and recombination proteins [BR:
sje03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
AAV35_012945
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_XRCC3_RpoA
HHH_5
DUF961
SAM_EPH
Motif
Other DBs
NCBI-ProteinID:
AKG05568
UniProt:
K2G7Q1
LinkDB
All DBs
Position
complement(2565214..2566158)
Genome browser
AA seq
314 aa
AA seq
DB search
MIEIEKPNIETVEISDDSTFGKFVVEPLERGYGTTLGNSLRRILLSSLPGAAVTSVQIDG
VLHEFSTIEGVMEDVTTVVLNLKKLALKIYSDDEKTLEIDVQGEGKVTAADITHDSDVEV
LNPELHIATLDSNTNLRMRITAESGRGYRPAEGNNHEDLPIGVIPVDSIFTPVSRVTYQV
ENTRIGHISNYDKLTLDVSTDGSIRPEEAISLGAKVYMEHLNIFVGLTDEAKNAEIMVEK
EEDQKEKVLEMTIEELDLSVRSYNCLKRAGINTVQELANKSEDDMMKVRNLGRKSLEEVK
HKLNELNLGLRKED
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgatcgaaattgagaaaccaaacattgaaacggtggagatcagcgatgattctactttt
ggtaaattcgtcgtcgagccgcttgagcgtgggtatggtacaacactaggtaactccttg
cgtcgtatcctattatcctcccttcccggtgccgctgtgacatctgtacaaattgacggg
gtccttcatgaattttcgacgatcgaaggtgtcatggaagacgtaaccactgtcgttttg
aatctgaagaaacttgctctgaagatttattctgatgacgagaagactttggaaatcgat
gtccagggtgaaggaaaagtcaccgctgctgatattactcatgatagtgacgttgaagta
ctgaatccggaacttcacatcgctacccttgatagtaatacgaatctgcgtatgcgtatt
acagctgaaagcggtcgaggatatcgcccggctgaagggaacaaccacgaagatttacca
ataggagtaattccggttgactctatcttcacccctgtctcccgtgtaacgtatcaggtg
gagaacacccgtatcgggcacatctccaactacgataaacttacactggatgtatcgacg
gatggcagcatccgtccggaagaggcgatctctttaggggctaaagtatatatggagcat
ttgaacatcttcgtcggattgacggatgaagcgaaaaatgccgaaattatggtagaaaaa
gaagaagatcagaaagaaaaagttcttgagatgacgatcgaagaactggatctctcggtt
cgttcttacaactgcctgaaacgtgctggtatcaacacggttcaggagctggctaataag
agtgaagacgatatgatgaaagtccgtaacctcggcagaaaatcgttggaagaagttaag
cacaaactgaatgaacttaaccttggccttcgtaaagaagactga
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