Salimicrobium jeotgali: AAV35_013560
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Entry
AAV35_013560 CDS
T04359
Name
(GenBank) recombination protein RecR
KO
K06187
recombination protein RecR
Organism
sje
Salimicrobium jeotgali
Pathway
sje03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sje00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
AAV35_013560
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sje03400
]
AAV35_013560
DNA repair and recombination proteins [BR:
sje03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
AAV35_013560
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
AAV35_013560
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Toprim_4
RecR_HhH
RecR_C
Toprim
RecR_ZnF
HHH
HHH_5
HHH_8
IMS_HHH
DZR
Motif
Other DBs
NCBI-ProteinID:
AKG03287
UniProt:
K2FK60
LinkDB
All DBs
Position
complement(2667410..2668006)
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AA seq
198 aa
AA seq
DB search
MYYPEPISKLIDSFTKLPGIGPKTAVRLAFYVLEMEEDDVLEFGKALVNAKRELTHCTNC
GHITDQDPCSICQDESRDSTLICVVQDPKDVIAMEKMKEFSGKYHVLHGAISPMDGIGPE
DINVESLIKRLKDEGVEELIIATNPNVEGEATAMYISRLVKPAGIRTTRIAHGLPVGGDL
EYADEVTLSKAMEGRREL
NT seq
597 nt
NT seq
+upstream
nt +downstream
nt
gtgtattatccagaaccgatttcaaagctgatcgacagctttactaaattgccagggatc
ggtcctaaaacggcggtccgtctggctttttatgttttagagatggaagaggacgacgtc
ctggagttcggtaaagcgcttgtgaatgcgaaaagggaactgacccactgtaccaattgc
ggacacattacggatcaggatccctgttccatctgccaggacgagtcgagagacagtacg
cttatctgcgtagtccaggacccgaaagacgtcattgctatggaaaagatgaaagagttc
agtggaaagtatcacgtgctccatggtgccatctccccgatggacgggataggtcctgaa
gacatcaacgttgaaagcttaattaagcgtctgaaagatgaaggtgtggaagaactcatc
attgccaccaacccgaacgtggaaggggaggctacggctatgtacatttcacgtctcgtg
aagccggccggaatccggacgacccgcatagcccatgggctgccggtcggcggggacctc
gaatacgcggacgaagttactctttccaaagcgatggaaggaagacgggagctctga
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