Sulfonitrofixus jiaomeiensis: WCY20_02235
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Entry
WCY20_02235 CDS
T11201
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
sji Sulfonitrofixus jiaomeiensis
Pathway
sji03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sji00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
WCY20_02235
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sji03400
]
WCY20_02235
Enzymes [BR:
sji01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
WCY20_02235
DNA repair and recombination proteins [BR:
sji03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
WCY20_02235
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
PriA_3primeBD
ResIII
PriA_C
Zn_ribbon_PriA
nSTAND3
AAA_19
PhoH
nSTAND_NTPase5
AAA_22
Dehydratase_SU
Rcc01698_C
Motif
Other DBs
NCBI-ProteinID:
XAU12861
LinkDB
All DBs
Position
442958..444838
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AA seq
626 aa
AA seq
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MYFYKIALLNSPLEPLTYQSQSVIAVGHEVNVSLRNRQLTGVVVQACEIPEFKTSEIGTL
TSNYYSPKQIKTAKFISEYYICSLGEALNLFVPFLSEECAVGTVNGKSVMENGEERKKQN
NTSIVLSKKQDDALTFLQQHPVALLFGDTGSGKTEIYMRYFEDILQQGKRAIFLMPEISL
TPQMQIRLEEHFGDAIVMWHSKVTKVQKKKLLERIYNGSAKIIAGARSALFLPVEDLGLI
VVDEEHDDSYKSNARPRYNARDMAIYMGQLYKVPVVLGSATPSMSSYVKFPHYRLKGGHY
TATREFFFESSREEITQNVEAAIVGTKAKDEQAMLFVPTRANFKYLICEACGHTHSCPYC
SVGMSVHHKSNAIKCHYCNFSERIPTQCTKCGHEMLTSNRLGTAEAVRFFEENHPQIRVG
QFDRDAVSTQNKLKKLLKAFNAGEIDLLIGTQMLSKGHDYHDVTLAVILGLDNQLNMSDY
RAREKALSLLIQIAGRSGRKKAAKVLVQSYNRDFFEPYLNNYEQFLEDEKVFRQALYPPY
RKLSRVLFAHQNAYKAEQDMMAMVENLRRFTAVEVIGFGTAQIEKIANKYRFQILLRAEK
STELIEALMRSKTPLAEIDMDPIEFM
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
ttgtacttttataagatagcactgctcaactccccccttgaaccgctaacctaccaatca
caaagtgtcattgccgttgggcatgaggttaatgtatcacttcgcaaccgtcagttgacc
ggtgttgtcgtacaggcttgtgaaatcccggaattcaagacgagcgagatcgggacactg
acgtcaaactactattctcctaaacagatcaagaccgcaaaatttatctcagagtattat
atttgttctctcggcgaagccttgaacctttttgtcccttttttaagtgaagagtgtgcc
gttggcacggtaaatggtaaatcggtaatggagaatggggaagaaaggaaaaagcagaat
aatacatccatagtcctctcaaagaaacaagatgatgcgttaacgtttttgcagcagcat
cctgttgctttgctgttcggtgacacgggttccggcaagaccgagatctacatgcgctat
tttgaagatattttacaacagggcaaacgagcgatctttctgatgccggagatctctctg
acgccgcagatgcagatccgcctcgaagagcatttcggcgatgccatagtgatgtggcac
tccaaggtgaccaaggtgcagaagaagaagcttcttgagcgcatctataacggttcggca
aagatcattgccggagcccgctcggcgctctttctaccggtggaagatctggggttgatc
gtggtggatgaagagcatgatgacagctacaaatccaacgcccgtccgcgctataatgcc
cgggatatggcaatctatatggggcagctatacaaggttcctgtcgtcctgggaagcgcg
acaccatcgatgagctcctacgtgaagtttccccactacaggctgaaaggcggccactat
accgctacaagagagtttttttttgagtcttcgcgagaggagatcacgcaaaacgtcgaa
gctgccattgtgggaacaaaagccaaagatgaacaggcgatgcttttcgttccgacacgg
gcaaatttcaagtatctgatctgtgaagcctgcggtcatacccactcgtgtccctattgc
agtgtcggtatgagtgtgcatcataaaagcaatgccattaagtgccactactgtaatttt
tcggaaagaattccgacacaatgcacgaagtgcggccatgagatgctgacctcaaaccgt
ttgggcacagcggaggctgtccgttttttcgaagagaaccacccgcagatcagggtaggg
cagtttgaccgtgatgccgtcagtacacaaaacaaactcaaaaaactgctcaaagccttc
aatgcgggagagatcgatctgctgatcggtacgcagatgctctctaaagggcacgattac
catgacgtgacactggcggtgatcctggggcttgataaccagcttaatatgagtgattat
cgtgcccgggagaaggcgctgtcgttactcatacagatagcaggacgcagcggtcgtaaa
aaagcagccaaagtcctggtgcaaagttacaacagagatttttttgaaccgtatctcaat
aactacgagcagttcctcgaggatgaaaaagttttccgccaagcgctttacccgccgtac
aggaagttgtcacgtgtgcttttcgcgcatcaaaatgcctataaagcagaacaagatatg
atggcaatggtcgaaaatttacgtcgttttacagctgtagaagtcatcggttttggtact
gcacagatcgagaaaatcgccaacaagtaccgttttcagatcttgttaagagcagaaaaa
agtacagaattaattgaagctcttatgcgcagtaaaacgccattagccgagatcgatatg
gaccctatagaatttatgtga
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