Sulfonitrofixus jiaomeiensis: WCY20_03840
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Entry
WCY20_03840 CDS
T11201
Symbol
xseA
Name
(GenBank) exodeoxyribonuclease VII large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
sji Sulfonitrofixus jiaomeiensis
Pathway
sji03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sji00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
WCY20_03840 (xseA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sji03400
]
WCY20_03840 (xseA)
Enzymes [BR:
sji01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
WCY20_03840 (xseA)
DNA repair and recombination proteins [BR:
sji03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
WCY20_03840 (xseA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
GrpE
Fe-ADH
Apolipoprotein
RecJ_OB
PIN_6
Baculo_PEP_C
Motif
Other DBs
NCBI-ProteinID:
XAU13166
LinkDB
All DBs
Position
749507..750760
Genome browser
AA seq
417 aa
AA seq
DB search
MQQAITVSTLNEQIKGLLESTFVRVYVEGELSRITHHNSGHIYFTLKDAGSAVSGVMFRG
NASKLKFRLEEGLKVIVEGAVTVYTPRGSYQINAFNIEPAGHGALALAFEQLKAKLSAQG
YFDPAIKKAMPKFPKRIALVTSATGAALQDMQRVAAQRWPLAQLFVYDTIVQGEYAAPSI
VNAIQAADSQDFDIIVVSRGGGSMEDLWGFNEEIVANAIFHARTPVVSAVGHEIDWLISD
FVADLRAPTPSAAMQMILPDQNELLQTIDILGQQFTQSLQQKLYSAGEKLSHLKNSYERH
SIEQRIKNRLEEIAQLSARFDQSINFVTENAARKLAPVAENLARQANSNLIQNRNRLSTL
LQALQAQDPKQKSRKGYAQIAKEGKVIDLSALDIGDSFEAMDSSRSVTAVVENITKF
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgcagcaagccatcaccgtatcgacactcaacgaacagatcaaaggcctcctggagagc
acctttgtccgtgtctatgtcgagggtgaactctcccgcataacccatcacaacagcggg
catatctactttaccctcaaagatgccggttcggccgtcagcggggtgatgttccgcggc
aacgcttccaaactgaagtttcgcctcgaagaggggctcaaagtgatcgtcgaaggggcg
gtcaccgtctatacaccgcgcggcagctaccagatcaacgcctttaatatcgagcccgcg
ggtcacggcgccctggctttggccttcgagcagctcaaagcgaaactgagcgctcagggc
tatttcgatccggccatcaagaaagcgatgccaaaattccccaaacgcatcgctctggtc
acgtcggcgacgggtgcggcactgcaggatatgcagcgcgtcgctgctcagcgctggcct
ttggcgcagctctttgtctacgacaccatcgtccagggagagtatgccgcaccttcgatc
gtcaacgcgatccaggcggccgacagtcaggatttcgacatcatcgtcgtaagccgcggc
ggcgggagcatggaggacctttggggcttcaacgaagagatcgtcgctaatgccatcttt
catgccaggacacctgtcgtctctgccgtcggccatgagatcgactggctgatcagcgat
tttgtcgccgacctgcgtgcaccgacaccgagtgccgcgatgcagatgatcttgccggac
cagaacgagctgcttcagacgatcgacatcctgggccagcagtttacgcagagccttcag
cagaagctttacagtgccggtgaaaaactttcccacctcaaaaactcatatgaacgtcat
tcgatagagcagcgcatcaagaacaggcttgaagagatcgcgcagctcagcgcacggttt
gatcagagcatcaactttgtcaccgaaaacgctgcgcgcaaactcgccccggtcgccgaa
aatctggcgcgccaggcaaacagcaacctgatccaaaaccggaacagactatccacactg
ctgcaggcgctgcaggcgcaggaccccaagcagaaaagccgaaaagggtatgcccagatc
gccaaagaaggcaaagtcatcgacctgtctgcgctggatatcggtgacagctttgaagcg
atggattcttcgagaagcgttacggctgttgtagaaaacataacgaagttttaa
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