Sulfonitrofixus jiaomeiensis: WCY20_04970
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Entry
WCY20_04970 CDS
T11201
Name
(GenBank) RluA family pseudouridine synthase
KO
K06180
23S rRNA pseudouridine1911/1915/1917 synthase [EC:
5.4.99.23
]
Organism
sji Sulfonitrofixus jiaomeiensis
Brite
KEGG Orthology (KO) [BR:
sji00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sji03009
]
WCY20_04970
Enzymes [BR:
sji01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.23 23S rRNA pseudouridine1911/1915/1917 synthase
WCY20_04970
Ribosome biogenesis [BR:
sji03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
WCY20_04970
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
DUF1122
SirC_C
Motif
Other DBs
NCBI-ProteinID:
XAU13383
LinkDB
All DBs
Position
complement(977080..978051)
Genome browser
AA seq
323 aa
AA seq
DB search
MTPKSTTFYATDTVRLDTFLSSELGVTRNQIVQLIKQDAVMVEGKKVSKPGLKLKIGQEV
NITFPEAKVTPAKEIDFDVEILYEDDDLLVINKPSGLTVHPAPSVKEPTLVDWLKHKNIR
LSTLSGEERHGIVHRLDKGTSGVMVVAKNNEAHEALSAQLQDKSMGRYYLAVINPPLKEA
FVTVDKPIGRSSQNRLKMAEVAGGKEARTLFKKLALSKDEKNELIACKLFTGRTHQIRVH
LETFSRHILGDHLYGIKNDKQEQILLHAYVIYFIHPTTKKRCQFSAPLSKAMKEYLEKNF
DQEIINEQLPQENFERHFDISAA
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atgacaccaaaatcgaccacattttatgccactgacaccgttcgactggacactttttta
agcagtgaactgggtgttacccgcaatcagatcgtccagctcatcaagcaggatgccgtt
atggtcgagggtaagaaggtctccaagcccggcctgaagctcaaaatcggccaagaggtg
aacatcacctttccggaggccaaggtcacccctgccaaagagatcgatttcgatgtagag
atcctctatgaagatgacgacctgctggtcatcaacaaaccctccggactgacagtccac
cctgccccaagtgtcaaagagccgacccttgtcgactggcttaaacacaaaaacatacgc
ctttcgacgctcagcggcgaagagcgtcacggtatcgtccaccgtctggacaaagggact
tccggcgtgatggtcgtcgccaaaaacaacgaagcccatgaagcactctcggcgcagctg
caggacaaatcaatgggccgctactacctggcggtgatcaatccgccgcttaaagaggcg
tttgtgacagttgacaagcctatcggccgcagcagccagaaccgtctgaagatggcagag
gtggcagggggcaaagaggccaggaccctcttcaaaaagctcgcactctccaaagatgag
aaaaacgagctgatcgcctgcaagcttttcaccgggcgtacccatcagatccgcgtccac
ctggagacattttcgcgtcatattttaggcgaccatctttacggcatcaaaaatgacaaa
caggagcagatactgctgcatgcctatgtcatctacttcatccacccgacgaccaaaaag
agatgccagttttcagcgccgctgagcaaagcgatgaaagagtatttagaaaaaaacttc
gaccaggagattatcaatgaacagttacctcaagaaaattttgagcgccacttcgatatt
agtgctgcttag
DBGET
integrated database retrieval system
