Sulfonitrofixus jiaomeiensis: WCY20_05335
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Entry
WCY20_05335 CDS
T11201
Symbol
rny
Name
(GenBank) ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
sji Sulfonitrofixus jiaomeiensis
Pathway
sji03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sji00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
WCY20_05335 (rny)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sji03019
]
WCY20_05335 (rny)
Messenger RNA biogenesis [BR:
sji03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
WCY20_05335 (rny)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
KH_2
KH_KhpA-B
dUTPase
Smg8_Smg9
Motif
Other DBs
NCBI-ProteinID:
XAU13454
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Position
1048145..1049713
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AA seq
522 aa
AA seq
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MINEILLGGGIATLSGLLGFFICKKISSAQFDIYVQQAKAKAAAIDSEAELLLERSNIKA
REIELQAEKQYNEASERALKELSGREAAIAGREKDLEAEVKEKQRELENERGIVTSLKLN
VERQSRSLDKLKKEYEQSLDKAINAVENAAGMTKEEAKELLLKQVEERSRADVAHIVRRY
ENEAKQEGERKANYILAQATSRFAGEFAHERLMNTVQLSDDELKGRIIGREGRNIKTLEA
LMGVDIIIDDTPNAIIVSSFNMYRRAIATRTLELLVEDGRIQPARIEEIYNKVCAQFEEK
IIEDGENVVFELGLSGLHPELIKLIGRLRYRASYGQNALAHTLEVANLAGIMAAEMGGDA
KLAKRAGVLHDIGKALTHDFEGSHVDLGAEVCRRYNEDPVVINAIYAHHGLQDIETIECA
AVCAADTLSAARPGARREVLESFLKRVTAIEEIATSKTGVKQAYAINAGREVRVMVSAEL
VSDDEASLLAKEIAEEIESKVSYPGNIKVNVIRESRAVEYAK
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
atgataaacgaaatactcttaggaggtggcatagccacacttagcggactgcttggattt
tttatctgtaaaaaaatcagcagtgcacaatttgacatctatgtacaacaggccaaagca
aaggccgctgcgattgacagtgaagccgaactgttgcttgaacgatcaaatatcaaagcc
agagagatcgaacttcaggccgagaagcagtacaatgaggcaagcgaacgtgcccttaaa
gagctctccggacgcgaagcggccatagcaggcagggaaaaagatctcgaggccgaggtc
aaagaaaagcagagagaactggagaatgaacgcggcattgttacaagcctgaaactaaat
gttgaacgccaatcacggagtctggacaagcttaaaaaagagtatgaacagagtctggac
aaagcgatcaatgccgtagaaaacgctgcgggaatgacaaaagaagaggccaaagagctt
ctgttgaagcaggttgaagagcgttctcgtgccgatgtcgcccatattgtccgtcgttat
gaaaacgaagccaaacaagagggcgaacgtaaggcaaactacatcctggcacaggcgacg
tcgaggtttgccggtgaatttgcccatgaacgtctgatgaatacggtgcagttgagcgat
gacgagctcaaagggcgtattatcggccgtgagggccgaaacatcaagacccttgaggca
ctgatgggtgtggatatcatcatcgacgataccccgaatgcgatcatcgtaagcagcttc
aacatgtaccgccgggcgatcgccacacgtaccttggagcttctggtcgaagacgggcgc
atccagccggcgcgtatagaagagatctacaacaaagtctgcgcgcagttcgaagagaag
atcattgaagacggcgagaacgttgtctttgaactggggctcagcggactgcatccggaa
ctgatcaaactgatagggcgtctgcgctatcgggcaagttacggtcaaaatgccttggcg
catacactcgaagttgccaaccttgcggggatcatggcagcggagatgggcggtgatgca
aagttggctaaacgggcgggcgttttgcatgatatcggcaaggcgttgacccacgacttt
gaaggctcccatgtcgatctgggtgcggaggtctgtcgacgctacaatgaagatccggtg
gtcatcaatgccatctatgcccaccatggactgcaggatatagagaccatagaatgtgcg
gcggtctgtgcggcagacaccctttctgctgcacgcccgggagcacgcagggaagttctg
gaaagctttttgaaacgggttactgcgatcgaagagatcgcgacctccaaaacaggggtg
aaacaggcctacgccatcaatgccgggcgtgaagtacgtgttatggtcagtgcggaactg
gtgagtgacgatgaggcgtctctgctggctaaagagattgccgaagagatcgaatccaag
gtgagctatcccggcaatatcaaagtcaacgtgatccgtgaaagccgcgctgtagagtat
gctaagtag
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