Sulfonitrofixus jiaomeiensis: WCY20_08675
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Entry
WCY20_08675 CDS
T11201
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
sji Sulfonitrofixus jiaomeiensis
Pathway
sji03030
DNA replication
sji03430
Mismatch repair
sji03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sji00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
WCY20_08675 (dnaE)
03430 Mismatch repair
WCY20_08675 (dnaE)
03440 Homologous recombination
WCY20_08675 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sji03032
]
WCY20_08675 (dnaE)
03400 DNA repair and recombination proteins [BR:
sji03400
]
WCY20_08675 (dnaE)
Enzymes [BR:
sji01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
WCY20_08675 (dnaE)
DNA replication proteins [BR:
sji03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
WCY20_08675 (dnaE)
DNA repair and recombination proteins [BR:
sji03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
WCY20_08675 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
DUF655
HHH_3
DUF758
Motif
Other DBs
NCBI-ProteinID:
XAU11385
LinkDB
All DBs
Position
complement(1730578..1734189)
Genome browser
AA seq
1203 aa
AA seq
DB search
MSVQPFTHLHLHTEYSLLDGANKISNLVERVKALGMTSVAMTDHGNMFGAIDFYKQMKAA
GIKPIIGMEGYIHNGEMIDDRSTKQRFHICLYAKNQKGYENLMYLSSKAYIDGFYYFPRI
NKKELREHSEGLICSSACLQGEVNWHLNLQNQRNVRNGAEGYEGAKRVALEYKEIFGDDF
YLELMRHGIGDQLYIDEQVLRLSRETGIKIVATNDTHYTFPDDAQYHEAFMCIGMNKLYD
DPNRMRHSVHEFYLKSPEQMARLFADIPEALENTQEIVEKCQLELKLGDPTPPNFKFTPE
YAARENLDINYEDDAPLSEDADKEAKKKWLSAADKNDAEYFIHRCKVGLENRLQHVPQER
HDEYRERLEFEMDVINSMKFPGYMLIVWDFVKEAKNMGVAVGPGRGSAAGSLVAFALDIT
DIDPMKYDLLFERFLNPERVSMPDIDMDFMQARRGEVIDYVVEKYGRNQVAQIITFGSLL
AKGVIRDVSRVLDVPLSQADKMAKLIPDELGITLNGKGKPGSEGFKDGAFQKEPKIRELI
ETDPQAARVWEFSKKLEGLKRNAGMHAAGVVISNRELWYKTPIYKPSGETTFVTQYSLNY
LEDVDLIKFDFLGLKTLDVIDAAIKLVKTRYDRDINWHEIDENDAEVYRVIQTGETVGMF
QIESSGMQDLNKRLKPSTFEDLIAVLALYRPGPMESGMLDDFIERKHGRQEIVYVFDALE
EILKPTYGVIVYQEQVMQIVQTIGGFSLGGADIVRRAMGKKKVEEMLKYNKLFSEGAQKQ
GLDYKTASELFDLIEKFAGYGFNKSHSAAYAMVTFQTAWLKTYYPQEFMAALLTSEKDNT
DKIVKYIDEVKRMGIELSPPDINHSQLEFSAIEKDGQDVILFGLGAIKGVGEAAVQSILE
VRENGEFSSMQDFVNRIEPQKVNKRVLESITKSGGFDAFGLSRRAILGQMDLIIQTAKDA
SQAKKNAIGSLFGDDEEISTVELTLKDEAEFGLKEILDFEKDTLGFYVSGHPLDDFRERI
DALTYTLSSDIDNITDGSTAIFIGKVEEITKKISKKGNQFGIVNLMDFHGNIEMMLFSDK
LDQLEGMNLNDPVAFKVKVTHTEQFTRMSVLKIFTLDEVKKEAKKVVTKIVEKPPEMLKL
RLRMDKSTELLEELYRLVRRYPGNRPLQLNIVSKLQNVVIDSAIRVDSKVLDELAHFEAV
DVA
NT seq
3612 nt
NT seq
+upstream
nt +downstream
nt
atgagcgtacagccttttacccaccttcacctgcataccgaatactcccttcttgacggc
gccaacaagatatccaaccttgttgagcgtgttaaagcattgggaatgacttcggtggcc
atgaccgaccacggcaacatgttcggtgccatcgatttttacaagcagatgaaagcggcg
ggcatcaaaccgatcatcgggatggaaggctacatccacaacggcgagatgatcgacgac
agaagtacaaaacagcgtttccatatctgcctctacgccaagaaccagaaagggtacgaa
aacctgatgtatctcagctccaaagcctacatcgacggcttctactacttcccgcgtatc
aacaagaaagagctccgcgagcatagcgaggggctcatctgctcttctgcctgtctgcag
ggcgaggtcaactggcatctcaacctccagaaccagcgtaatgtccgtaacggggcagag
gggtacgagggggcaaaacgtgtcgcgctggagtataaagagatcttcggcgacgacttc
taccttgaactgatgcgccacggcatcggcgaccagctctatatcgacgagcaggtgcta
agactcagccgggagacggggatcaagattgtcgccaccaacgacacccactacaccttt
cccgacgatgcacagtaccatgaggcctttatgtgtatcgggatgaataaactctatgac
gatcccaaccgtatgcgccactcggtgcacgagttctatctcaaatcgcccgaacagatg
gcccgcctcttcgccgatatccccgaagcgctggagaatacccaggagatcgtcgagaag
tgccagcttgagctgaaactcggtgacccgacaccgccgaacttcaagttcacccctgaa
tatgctgcgcgcgagaaccttgatatcaactatgaggacgatgcaccgctgagtgaagac
gccgacaaggaggcgaaaaagaaatggctgagtgctgccgacaagaacgacgccgagtac
tttatccaccgctgcaaggtcgggcttgaaaaccgtcttcaacatgtcccgcaggaacgc
catgacgagtaccgggaacgtcttgaatttgagatggatgttatcaactccatgaagttc
ccgggttatatgctgatcgtctgggatttcgtcaaagaggcgaagaatatgggcgtggcc
gtcggaccgggacggggttccgccgccggttcgctggttgcgtttgcccttgatatcacc
gatatcgacccgatgaaatacgacctgctttttgagcgttttctcaacccggagcgggta
tcgatgcccgatattgatatggactttatgcaggcccgccgcggcgaggtgatcgactat
gtcgtcgagaagtacggacgtaaccaggtcgcgcagatcatcaccttcggttccctgctg
gccaaaggggtcatccgcgacgtatcgcgcgtcctcgacgtgccgctttcgcaggccgac
aagatggcgaaactgatcccggacgaactgggcatcaccctcaacggcaagggcaaaccc
ggcagcgagggcttcaaagacggggctttccagaaggagccgaagatccgggaactgatc
gagaccgacccgcaggctgcacgcgtctgggaattctccaaaaaactcgaagggctaaag
cgcaatgcggggatgcacgctgccggtgtcgttatctccaaccgggagctctggtacaag
accccgatctacaagccttcgggcgaaacgacctttgtcacgcagtattcgctcaactat
cttgaagatgtcgatctcatcaagttcgacttcctgggtctgaagacccttgatgttatc
gatgcggcgatcaagctggtcaaaacccgttatgaccgggatatcaactggcatgagatc
gatgaaaacgatgccgaggtatacagggtgatccagacgggtgagacggtcgggatgttc
cagatagagagttcgggaatgcaggatctgaacaaacggctcaaaccttcaaccttcgaa
gacctgatcgcggtcctggcactctaccgtccgggtccgatggagtcggggatgctcgat
gatttcatcgagcgtaagcacgggcgccaggagatcgtctatgtctttgatgccctcgaa
gagatactgaagccgacctacggggtcatcgtctaccaggaacaggtcatgcagatcgtt
cagaccatcgggggcttcagcctcggcggtgcggacatcgtccgccgcgcgatgggtaag
aagaaggtcgaggagatgctcaagtacaacaaattgttctccgaaggggcgcaaaaacaa
gggctcgactataagaccgcttcggagctttttgacctgatcgaaaagttcgccggttac
ggtttcaacaaatcgcactcggcggcctatgcgatggtcacctttcagacggcgtggctg
aagacctactatccgcaggagttcatggcggcactgctcacctcggagaaggacaatacg
gacaagattgtcaagtatatcgatgaggtcaagcgcatgggtatcgaactctcgcctccc
gatatcaaccattcgcagctggagttctcggcgatcgagaaagacggtcaggatgtcatc
cttttcgggctcggcgcgatcaaaggcgtcggagaagcggccgtccagtccattctggag
gttcgtgagaacggcgagttcagttcaatgcaggactttgtcaaccgcatcgagccgcag
aaggtcaacaagagggtgctcgagtcgattacgaaatcgggcggttttgatgctttcgga
ctctcccgccgtgcgatccttgggcagatggacctgattatccagacagcgaaagatgct
tcacaggcgaagaaaaatgcaatcggcagtctcttcggtgatgatgaggagatctctacc
gttgagcttaccctgaaagacgaggcggagttcgggctcaaagagatactggattttgag
aaagatacgctgggcttttacgtttcgggccacccgctcgatgatttccgcgagcgcatc
gatgcacttacatacacgctctcttccgatatcgacaacatcaccgacggttcgacggcg
atctttatcgggaaagtcgaagagatcaccaagaagatctccaagaagggcaaccagttc
ggtatcgtcaacctgatggactttcacggcaatatcgagatgatgctcttcagtgataaa
ctcgatcagctcgaagggatgaatctgaatgacccggttgcatttaaagtcaaagtgacc
catactgagcagtttacccgcatgagtgttttgaagatttttaccctggacgaagtcaaa
aaagaggcaaaaaaggtggtgacaaagatcgttgagaagccgcctgaaatgttgaaactt
cgcctgcgtatggacaagagcacggaattgctcgaagagctttaccgtctggtccggcgt
tatccgggcaaccgcccgcttcagctcaacattgtctcaaaattgcagaatgttgtgatc
gattctgcgataagggtggacagcaaagtactcgacgaactggcacatttcgaagcagtg
gatgtggcgtaa
DBGET
integrated database retrieval system
