Sulfonitrofixus jiaomeiensis: WCY20_09265
Help
Entry
WCY20_09265 CDS
T11201
Name
(GenBank) tRNA pseudouridine(13) synthase TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
sji Sulfonitrofixus jiaomeiensis
Brite
KEGG Orthology (KO) [BR:
sji00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sji03016
]
WCY20_09265
Enzymes [BR:
sji01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
WCY20_09265
Transfer RNA biogenesis [BR:
sji03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
WCY20_09265
Prokaryotic type
WCY20_09265
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
DUF7744
Motif
Other DBs
NCBI-ProteinID:
XAU11499
LinkDB
All DBs
Position
complement(1850623..1851771)
Genome browser
AA seq
382 aa
AA seq
DB search
MKRKYIQNHNPVTFSFKPTREDFIVDEIPLYEEGKRGNYLHLHIKKTDMSTMEMIAVLEE
QTKFHNISYAGLKDKYATTTQYISMPASYEKYFAKFKHPQIEILDSFLHKEKLNIGDLKG
NRFKIRLHDVTPKSAEKLDEVLQEIVRQGMPNYFGYQRFGQDEDHFEKSKEAAHGSKVFR
DRRLNKLMTNAYQSYLFNDWLDERVRLCRDLDYMDLDLFEKKWGLSTEEVKQLQGQSSIF
KVLPGEIMLDVQSGKWVNVTDLQSVKKPYKERKLQPTGLLVGNKVWRSRGAAGAIEARHD
DDEVTMAGERRVAWVYPKEIKSKYLKKESVYELSFALPKGSYATVLLENLANRDIEGVHE
PKKTKKSASFRFDDPDDYDDEY
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgcaaatacatacagaaccataatcccgtgacattcagctttaaaccgacccgc
gaggatttcatcgtcgatgagatccccctttacgaagagggcaaaagaggcaattacctg
catctgcacatcaaaaagaccgacatgtccactatggagatgatcgccgttctggaggag
cagactaagttccacaacatctcctacgcgggattgaaggacaagtacgcgacgaccacg
cagtacatctcgatgccggcctcgtatgagaagtattttgcgaagttcaagcacccgcag
atagagatactcgactcgttcctccataaagagaagctcaacatcggtgacctcaaaggg
aaccgcttcaagatccgccttcacgacgtgacgccgaaaagtgccgagaagctcgatgag
gtgcttcaggagatcgtccgtcaggggatgccgaactacttcgggtaccagcgtttcggg
caggacgaagaccacttcgagaagtccaaagaggcggcgcacggctccaaggtcttccgc
gaccgccgtctgaacaagctgatgaccaatgcctaccagtcctaccttttcaacgactgg
ctggacgaacgggtccgtctctgccgcgatctggactacatggacctggatctctttgag
aagaagtgggggctttcgaccgaagaggtcaaacagcttcaggggcagtcctccatcttc
aaggtgcttccgggcgagatcatgctcgacgttcaaagtggcaaatgggtcaatgtcacc
gacctccagtcggttaaaaagccctacaaagagcgcaagcttcaaccgacgggactgctg
gtaggtaacaaggtgtggcgctcgcgcggcgcggccggtgcgatcgaagcacgtcatgac
gatgacgaggtgacgatggccggcgaacgccgcgtcgcctgggtctaccccaaggagata
aagtcgaagtacctcaaaaaagagagcgtctatgagctctctttcgcactgccgaaaggc
tcctacgccaccgtgcttctggagaacctcgccaaccgggatatagagggcgtgcacgag
cctaagaaaacgaagaagtctgcttctttccggttcgatgatccggatgattacgatgat
gagtattag
DBGET
integrated database retrieval system
