Sulfonitrofixus jiaomeiensis: WCY20_11590
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Entry
WCY20_11590 CDS
T11201
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
sji Sulfonitrofixus jiaomeiensis
Pathway
sji03420
Nucleotide excision repair
sji03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sji00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
WCY20_11590
03430 Mismatch repair
WCY20_11590
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sji03400
]
WCY20_11590
Enzymes [BR:
sji01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
WCY20_11590
DNA repair and recombination proteins [BR:
sji03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
WCY20_11590
MMR (mismatch excision repair)
Other MMR factors
WCY20_11590
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
PcrA_UvrD_tudor
eIF3_p135
CarD_TRCF_RID
DUF6003
AAA_11
Motif
Other DBs
NCBI-ProteinID:
XAU11936
LinkDB
All DBs
Position
2342972..2345020
Genome browser
AA seq
682 aa
AA seq
DB search
MDKIFNNLNESQSSAVKQIDGPLLILAGAGSGKTKTITSRLAYLLDIVGIAPNNTLTLTF
TNKAAKEMQERAFAMINPTSYPPLLCTFHKFGLLFLKFNIHLLGRLNNFVVIDTDDKKRI
LKKINAELPLPLIASEISRYKNSLITPEQAYAQAELKNYKQIAKIYEEYEAYLLENNLVD
FDDLLALTYRLLDENEELAQRTSEQYQYIMIDEYQDTNELQFRLLQKLCMTHDNLCVVGD
DDQSIYGWRGAHVRNILEFHEDFENTTVVKLEHNYRSRAAILEVANELIQHNRSRLGKKL
IPTREGGDAVVTLSSNDENEEARKIAAKIAALINKGVAPREIAVLYRVNALSRSLEEGLN
RAGIPYKLVGGLRFYDRAEVKDLISYLRLVTNPHDNFSMKRIINKPKRGLGKASVEKVEL
AAIAQQVSMYDFIKNSSIAELEALVKKKNTQTLKKFAEDIDEVVMIAEHSTYDFIDALED
RFRLKDIYKNMPDETERVANMDEFYGLFRDFIKQSPEATLDEFLNELTLQSDQDEVEGES
IYIMSIHASKGLEFEHLFIIGLEEGFLPLIGDGSDTEEERRLGYVAFTRAKDTLTLSHVN
SRFYKGRRTDLNKSRFLTEAGLCEGSLKVEQNTAFKKGDLVRHKIFGPGRVLGVSKAGRE
FKLKINFGGTQRDILASFVERL
NT seq
2049 nt
NT seq
+upstream
nt +downstream
nt
atggataaaattttcaacaatttaaacgaatctcaaagttcggctgtcaaacagattgac
ggccccctgcttatcctggcgggggcaggaagcggtaaaaccaaaactattacctcccgt
ctagcctatcttttagatatcgtcggtatcgctcccaataatacactgacgctgacattt
accaataaagcggctaaagagatgcaggaacgtgcatttgccatgatcaatccgacttca
tatccgccgctgctgtgtaccttccacaaattcggtcttctctttttaaaattcaatatc
catcttttggggcgtctgaacaattttgtcgtgatcgatacggatgacaaaaaacggatt
ttgaaaaagatcaacgccgaattgcctttaccgcttattgccagcgagatttcccggtac
aaaaactctctgatcacacctgagcaggcctatgcacaggctgaactcaagaactacaaa
cagatcgccaagatctatgaagagtatgaggcttatcttttagagaacaaccttgtcgat
tttgatgatctgctcgcactcacctaccggcttctagatgaaaatgaagagcttgcacaa
cgtaccagcgaacagtaccagtacatcatgatcgatgagtatcaggacaccaacgaactg
cagttccgcctgcttcagaagctttgtatgacacatgacaacctctgtgtcgtcggcgat
gacgaccagagtatctatggctggcgcggggcacatgttcgcaatatcctggagtttcac
gaggattttgaaaacaccaccgttgtcaaacttgagcacaactaccgttcacgtgctgcc
atcttggaggttgctaacgagctgatccagcataaccgctcccgtcttggcaagaagctg
atcccgacccgggaaggcggcgacgctgttgttacattgagctccaatgatgagaacgag
gaagcgcgcaagatcgcagccaagatcgcagcacttatcaacaaaggggtcgcaccccga
gagatcgccgtactctatcgtgtcaatgccctttcacgttcactcgaagaggggcttaac
cgtgccgggatcccttataaactggtaggtggcctgcggttttacgatcgcgccgaggtc
aaggacctgatctcctatcttcgtctcgtcaccaacccgcatgacaacttttcgatgaag
cgcattatcaacaagcctaaacgcggcctcggcaaggccagcgtcgagaaggtggagttg
gcagcaatagcccaacaggtttcgatgtacgactttatcaagaacagttctatcgcagag
ctcgaagcattggtcaaaaagaagaatacccagacgctcaaaaaattcgccgaagatata
gacgaagtcgtcatgatcgccgaacattcgacctacgatttcatcgatgccctcgaagat
cgtttcagactcaaggatatctataagaacatgccggacgagactgaacgtgtcgccaat
atggatgagttttacggcctcttccgcgacttcatcaagcagtctcccgaggcgacgctc
gacgagttcctgaacgagcttacacttcagagcgatcaggacgaagtcgagggcgagagc
atctacatcatgagtatccatgcctccaaaggactcgagttcgagcacctcttcatcatc
ggtctcgaagaggggttcctgccgctgatcggcgacggcagcgacaccgaagaggagcgc
cgccttggctatgtcgcctttacccgtgccaaagacacgctgaccctctcacatgtcaac
agccgcttctacaaagggcgccgtacggacctgaacaaaagccgttttctgaccgaagca
ggtctgtgtgaaggttcgctcaaagtcgaacagaacaccgctttcaaaaagggcgacctc
gtccgccacaagatcttcggtccgggacgcgtgctcggtgtctccaaggcggggcgcgag
ttcaaactcaagatcaacttcggcggaacccagcgcgatattctcgcctcgtttgtggag
cgcctctaa
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