Sulfonitrofixus jiaomeiensis: WCY20_12800
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Entry
WCY20_12800 CDS
T11201
Name
(GenBank) RtcB family protein
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
sji Sulfonitrofixus jiaomeiensis
Brite
KEGG Orthology (KO) [BR:
sji00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sji03016
]
WCY20_12800
Enzymes [BR:
sji01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
WCY20_12800
Transfer RNA biogenesis [BR:
sji03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
WCY20_12800
Prokaryotic type
tRNA splicing ligases
WCY20_12800
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
RtcB
Motif
Other DBs
NCBI-ProteinID:
XAU12159
LinkDB
All DBs
Position
complement(2589672..2591105)
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AA seq
477 aa
AA seq
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MNIAQLEQIDSYSWRLPRTADEKRSEVLLYGSETLLETMDEKVLEQIRNVANLPGLVGPA
MAMPDAHWGYGFPIGGVAAFDAEQGGVISAGGVGFDISCGIRCLRTDLMLHEITGELETL
ADLLYARIPAGLGTTGHLHLTVSQLDEVLRKGAKWAVQKGYGREDDLAFIEEGGCMENAE
PDFVSELAKKRQRGEMGTLGSGNHYLEVQVVDTIYDAEAARAFGISEGQLLVSIHCGSRG
LGHQIGSDYMVTLAKEAGRLGIALPDRELACAPILSKEGQRYIGAMNAGINCALANRQIL
THLTREAFGSLFAGSSVETLYDVSHNTCKEERHVVDGEERTLWVHRKGATRAFGPGHSQL
PSAYRKVGQPVIIGGSMGTGSYILAGSDTSEARSFASASHGAGRSMSRHQAKKLWRGTEV
LRKLEGEGIHIRSDSMRGIAEEAPEAYKDVHEVAKVTEKAGLARRVAFLRPKVCIKG
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atgaatattgcgcaacttgaacagatcgacagttatagctggcggctcccccgtaccgcg
gatgagaaacgctcggaggtgctgctctacggctcagagacgcttcttgagacgatggac
gagaaggtgcttgagcagatccgcaacgtcgcaaatctgccggggcttgtcgggccggcg
atggcgatgcccgacgcccactggggctacggttttcccatcggcggcgtcgcggctttt
gacgcggagcagggcggcgtcatctcggcaggcggggtcgggtttgacatctcctgcggc
atccgctgcctccgcaccgatctgatgctccacgagataacgggcgagcttgaaacgctt
gccgatctgctttatgcccggatccccgcaggacttggtaccaccggccatctgcatctg
acggtgtcgcagctcgacgaggtgcttcgcaaaggggcgaagtgggccgtacaaaagggg
tacggccgcgaagatgacctcgcctttatcgaagaggggggctgcatggagaatgccgag
cccgacttcgtctccgaactggccaaaaaacggcagcgcggcgagatggggacgctgggt
tcggggaaccactacctcgaagtgcaggtggtcgacacgatctacgacgccgaggccgcc
cgcgctttcggcatcagcgaagggcagctgcttgtctcgatccactgcggttcgcgcggg
ctcggccaccagatcggcagcgactatatggtcacccttgcgaaagaggcgggacgcctc
ggcatcgcgctgcccgaccgggagcttgcctgcgcaccgatcctctcaaaagaggggcag
cgttacatcggcgcgatgaacgcggggatcaactgcgccctggccaaccgccagatactg
acgcacctgacgcgggaggcgttcggctctctttttgccggcagcagcgtcgagaccctc
tacgatgtctcgcataacacctgcaaggaggagcgccatgtcgtcgacggcgaagagcgc
accctgtgggtgcaccgcaaaggggcgacccgggctttcggtccgggacacagccagctt
ccttcagcgtaccggaaggtcggccagccggtcatcatcggcggcagcatgggaacgggc
tcctatattcttgccggcagcgacacctccgaagcgcgctccttcgcctcggccagccac
ggcgcgggacgctccatgagccgccaccaggcgaaaaaactgtggcggggaacggaggtg
cttcgtaagctcgaaggcgagggtatccacatccgttccgactcgatgcgcggtatcgca
gaggaggccccggaggcctacaaggatgtgcacgaagtggcgaaggtgacagagaaggcg
gggctcgcccgccgcgttgcctttttgcgcccgaaggtctgcatcaaaggataa
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