Streptococcus pneumoniae JJA (serotype 14): SPJ_1635
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Entry
SPJ_1635 CDS
T00873
Name
(GenBank) conserved hypothetical protein
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
sjj
Streptococcus pneumoniae JJA (serotype 14)
Pathway
sjj03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sjj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SPJ_1635
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sjj03019
]
SPJ_1635
Messenger RNA biogenesis [BR:
sjj03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
SPJ_1635
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
ATP-synt_B
V-ATPase_G
DivIVA
KH_KhpA-B
dUTPase
KH_2
Motif
Other DBs
NCBI-ProteinID:
ACO19233
UniProt:
C1CFW1
LinkDB
All DBs
Position
complement(1558140..1559753)
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AA seq
537 aa
AA seq
DB search
MEIMSLAIAVFAVIIGLVIGYVSISAKMKSSQEAAELMLLNAEQEATNLRGQAEREADLL
VNEAKRESKSLKKEALLEAKEEARKYREEVDAEFKSERQELKQIESRLTERATSLDRKDD
NLTSKEQTLEQKEQSISDRAKNLDAREEQLEEVERQKEAELERIGALSQAEARDIILAQT
EENLTREIASRIREAEQEVKERSDKMAKDILVQAMQRIAGEYVAESTNSTVHLPDDTMKG
RIIGREGRNIRTFESLTGVDVIIDDTPEVVTLSGFDPIRREIARMTMEMLLKDGRIHPAR
IEELVEKNRQEIDNKIREYGEAAAYEIGAPNLHPDLMKIMGRLQFRTSYGQNVLRHSIEV
AKLAGIMASELGENAALARRAGFLHDIGKAIDHEVEGSHVEIGMELARKYKEPPVVVNTI
ASHHGDVEAESVIAVIVAAADALSAARPGARSESLESYIKRLHDLEEIANGFEGVQTSFA
LQAGREIRIMVNPGKIKDDKVTILAHKVRKKIENNLDYPGNIKVTVIRELRAVDYAK
NT seq
1614 nt
NT seq
+upstream
nt +downstream
nt
atggaaatcatgtcgcttgcgattgctgtttttgccgtcatcattggtttagtcattgga
tatgtcagcatctcagctaagatgaaatcatctcaggaagctgcagagttgatgctttta
aatgctgaacaagaagcaactaatttacgtggacaagctgagcgtgaagcggatttactt
gttaatgaagccaaacgtgaaagcaagtctcttaaaaaagaagcactattggaggccaaa
gaagaagccagaaaataccgtgaagaagtggacgctgaatttaaatcagaacgtcaagaa
ctcaaacaaatcgaaagtcgtttgacagagagagctactagccttgaccgtaaggacgac
aatttgacgagtaaagaacaaacacttgaacaaaaagaacaaagtatttctgatagagcg
aaaaaccttgatgcgcgtgaagagcaattagaggaagtcgaaagacaaaaagaagcagaa
ctagagcgtattggtgctctgtctcaggcagaagcacgagatattatcttggctcagaca
gaggaaaacttgaccagggagattgccagtcgcattcgcgaagctgagcaagaggtcaag
gaacgttctgacaaaatggccaaggacatcttggttcaagctatgcaacgtatcgctggt
gaatatgtagcggagtcaacaaactcaacagttcatctgccagacgatactatgaaggga
cgcattattggtcgtgaaggtcgtaacattcgtacctttgaaagtttgacaggggtcgat
gtgattatcgacgatacaccagaagtggtgaccttgtcaggatttgatccgattcgtcgt
gagattgcccgtatgactatggaaatgttgctcaaagatggtcgtatacatccagctcgt
atcgaagagttggttgagaaaaaccgtcaagagattgacaataagattcgtgaatacggt
gaggctgctgcctatgaaattggtgcgccaaaccttcatccagacttgatgaagattatg
ggacgtttgcagttccgtacttcatatggacaaaatgttttgcgccattcgattgaggtt
gctaagttggctggtatcatggcgagcgaacttggtgaaaatgcggctcttgcccgtcgt
gctggattccttcacgatatcgggaaagccattgaccatgaggttgaaggtagccacgtt
gaaatcggtatggaattggcccgtaagtacaaggaacccccagttgtggtgaatacgatt
gctagtcaccacggagatgttgaagctgagagcgtgatagcagttatcgtcgctgcagca
gatgccttgagcgcagcccgtccaggtgctcgtagtgagtctcttgaaagctacatcaag
cgtctccatgatttggaagaaattgctaacggctttgaaggagtgcaaactagctttgcc
cttcaagcaggacgtgaaattcgtatcatggtcaatccaggaaaaatcaaggacgacaaa
gtcacaatcttggctcacaaagttcgtaagaaaattgaaaacaatctcgattatccagga
aatatcaaggtaaccgtgattcgcgagcttcgtgcagtagattatgctaaataa
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