Streptomyces janthinus: RI060_01480
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Entry
RI060_01480 CDS
T09385
Name
(GenBank) HAMP domain-containing protein
Organism
sjn
Streptomyces janthinus
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAMP
HAMP_2
Response_reg
HATPase_c
HisKA
GAF_2
GAF
Laminin_II
GAF_3
AAA_13
OmpH
Motif
Other DBs
NCBI-ProteinID:
WND16102
LinkDB
All DBs
Position
complement(278040..282317)
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AA seq
1425 aa
AA seq
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MDKAGTAIQDPSVVPGEPELRRLLAGLTAVRDGDFGTRLPEEAGGLLGEIASVFNGMVDQ
LSLFTSEVTRVAREVGTEGTLGGQAQVPGVSGTWADLTDSVNAMAGNLTTQVRDIAQVAT
AVAEGDLSQKIDVDARGEILELKNTINTMVDQLSAFADEVTRVAREVGTEGRLGGQADVK
GVRGTWRDLTDSVNFMAGNLTGQVRSIAQVATAVAKGDLSQKITVDARGEILELKNTINT
MVDQLSAFADEVTRVAREVGTEGRLGGQADVKGVRGTWRDLTDSVNFMADNLTAQVRSIA
EVTTAVAQGDLSQKIRVDARGEILKLKETINTMVDQLSSFADEVTRVSREVGTEGNLGGQ
ATVRGVSGTWKDLTDNVNVMASNLTGQVRSIAQVATAVARGDLSQKITVEAKGEVAALAG
TINTMVDTLSAFADEVTRVAREVGTEGRLGGQAHVPNVAGTWKDLTDNVNSMANNLTGQV
RNIALVTTAVANGDLSKKIDVDARGEILELKTTINTMVDQLSSFAAEVTRVAREVGSEGR
LGGQAEVEGVSGTWKRLTENVNELAGNLTRQVRAIAEVASAVAEGDLTRSITVDASGEVA
ELKDNINAMVESLRDTTQANQEQDWLKSNLARVSSLMQGHRDLDVVAELIMDELTPLVSA
QYGAFYLAEETGTGVELRLIGSYGCPADSDRLERIPLGHTLIGQAARSRRTITVDELPAD
YVAISSGLGRTTPTSLTVLPITVEEQVLGVIELASVTRFTQIHQDFLGQLRETIGVNVNT
ILANARTDELLDESQRLAEELRVRSDELQVRQGELQRSNAELEEKATLLATQNRDIEAKN
LQIEQARQELEDRAKQLSLASKYKSEFLANMSHELRTPLNSLLILAQLLAQNPSRNLTPK
QVEYAGIIHSAGSDLLQLINDILDLSKVEAGKMDIAPERVPLRRLLDYVEATFRPMTTQK
GLTFAITRAPGAPADLVTDDARLRQVLRNLLSNAVKFTERGGVELRIEPAADDDVPEIVH
RGGPVVAFRVEDTGIGIPEQQLETIFGAFQQADGTMSRKYGGTGLGLSITREIAHLLGGA
VTVDSNPGQGSTFTLYLPVARADFEELSATPRLEGTQDDDSAVGPAEGQNPATAPALPVP
HTRRLLIVEERVRGLLSVVAESAVADLDHSRAARDQHDAVEIVTAMDAQEAASALAAGPC
HCVVLSMDLPDGEGPRLLEAVDGDTALATVPVLVHNNHRPSAAQEAALQARADNRPLEVL
SSLDELKERITLHLSAEQPGDVVPLVRMEENLGTAPVVDITLAGHTVLVVDDDARNLFAL
SGILELHGLRVLHAENGRKSIDILTAHPEIRLVLMDVMMPEMDGYAATAEIRKMPEYRGL
PIVAVTAKAMPGDREKSLAAGASDYVTKPVDANDLIACVRHWLSA
NT seq
4278 nt
NT seq
+upstream
nt +downstream
nt
atggacaaggcgggtaccgcgatccaggatccgagcgtagtaccgggggagccggagcta
cggcggttgctggccgggctgacggcggtacgcgacggcgacttcggcacccggctgccg
gaagaggccggcggcctgctcggtgagatcgcgtccgtgttcaacggcatggtcgaccag
ttgtcgctgttcacctccgaggtgacccgtgtggcacgcgaggtcggtaccgagggcacg
ctgggcggtcaggcccaggtacccggggtttccggaacctgggccgacctgaccgactcg
gtcaacgccatggccggcaacctgaccacccaggtgcgtgacatcgcccaggtggccacc
gcggtcgccgagggggatctgtcgcagaagatcgacgtcgacgcgcgcggtgagattctg
gagttgaagaacaccatcaacacgatggtcgatcagctctcggcgttcgctgatgaggtc
acgcgtgtggcgcgggaggtgggtaccgagggccggctcggcgggcaggccgacgtcaag
ggtgtgcggggcacctggcgcgacctgaccgactcggtgaacttcatggcggggaacctg
accgggcaggtgcgctccatcgcccaggtggccaccgcggtcgccaagggggatctgtcc
cagaagatcaccgtcgatgcccggggcgagatcctggagttgaagaacaccatcaacacg
atggtcgatcagctctcggcgttcgctgatgaggtcacgcgtgtggcgcgggaggtgggt
accgagggccggctcggcgggcaggccgacgtcaagggtgtgcggggcacctggcgcgac
ctgaccgactcggtgaacttcatggcggacaacctgaccgcccaggtccgctccatcgcc
gaggtgaccacggccgtggcgcagggcgatctgtcgcagaagatccgcgtggacgctcgg
ggcgagatcctgaagttgaaggagaccatcaacacgatggtcgaccaactgtcgtccttc
gccgacgaggtcaccagggtgtcccgtgaggtgggcaccgagggcaacctcggcggccag
gccaccgtgcgcggagtgtcgggcacctggaaggacctcaccgacaacgtcaacgtgatg
gcctccaacctgaccgggcaggtccgctccatcgcccaggtggccacggccgtggcccgc
ggcgacctgtcacagaagatcactgtggaggccaagggcgaggtcgccgcactggcgggg
acgatcaacaccatggtcgacaccctgtccgccttcgcggacgaggtgacccgcgtggcc
cgggaggtcggcaccgagggacgcctcggaggccaggcccatgtgcccaacgtcgccggg
acgtggaaggacctcaccgacaacgtcaactcgatggcgaacaatctgaccgggcaggtc
cgcaacatcgcgctggtgaccacggctgtggccaacggcgacctgtcgaagaagatcgac
gtcgacgcgcgcggcgagatcctggaactcaagaccaccatcaacacgatggtcgaccaa
ctgtcgtcgttcgccgccgaggtcacccgcgtggcgcgggaggtgggcagcgaaggccgg
ctcggtggccaggccgaggtcgagggtgtctcgggtacctggaagcggctcaccgagaac
gtgaacgagctggccggcaatctgacccggcaggtgcgggccatcgccgaggtggccagt
gccgtcgccgagggcgacctcacccggtcgatcacggtggacgcctccggcgaggtggcc
gagctcaaggacaacatcaacgcgatggtggagtccctgcgggacacgacgcaggcgaac
caggaacaggactggctgaagtccaacctggcccgggtgtcctccctcatgcaggggcac
cgggacctggacgtcgtcgccgagctcatcatggacgagctgacgccgctggtctccgcg
cagtacggggcgttctacctggccgaggagaccggtaccggcgtggagctgcggctcatc
ggctcctacggctgtcccgccgacagcgaccgcctcgagcgcatccccctcgggcacacc
ctgatcggccaggcggcgcgcagccgccgcaccatcaccgtggacgagctcccggccgac
tacgtggccatctcgtccggcctcggcaggacgactccgacctcgttgacggtgctgccc
atcaccgtcgaggaacaggtgctgggcgtcatcgagctggcctcggtcacccggttcacc
cagatccaccaggacttcctggggcagctgagggagaccatcggcgtcaacgtcaacacc
attctcgccaacgcccgcaccgacgaactgctcgacgagtcccaacggctggccgaggaa
ctgcgcgtccgttccgacgagttgcaggtccgccagggcgagctgcagcggtccaacgcg
gagctggaggagaaggccaccctgctggccacgcagaaccgggacatcgaggcgaagaac
ctgcagatcgaacaggcccgccaggagctggaggaccgggccaagcaactgtcgctggcc
tcgaagtacaagtcggagttcctggccaacatgagccacgaattgcgcaccccgctcaac
agcctgctcatcctcgcccagttgctcgcacagaacccctcccggaacctgacgccgaag
caggtggagtacgcgggcatcatccactccgccggctccgacctgctgcagctcatcaac
gacatcctcgacctgtcgaaggtcgaggcggggaagatggacatcgcccctgaacgcgtg
ccgctgcgccgcctcctggactacgtcgaggccacgttccggccgatgaccacccagaag
ggcctgaccttcgccatcaccagggctccgggcgcccccgccgacctggtcacggacgac
gcgcggttgcgccaggtgctgcgcaatctgctgtccaacgcggtgaagttcaccgagcga
ggcggcgtcgaactgcggatcgagccggcggccgacgacgatgtacccgagatcgtgcac
cgcggcggccccgtggtggccttccgtgtcgaggacaccggcatcggcattcccgagcag
caactggaaaccatcttcggcgccttccagcaggcggacggcaccatgagccgcaagtac
gggggcaccggtctgggcctgtccatcacccgggagatcgcccacctgctggggggcgcg
gtgaccgtggacagcaacccggggcagggcagcacgttcacgctctaccttccggtggcg
cgcgccgacttcgaggagctctccgccacaccgcggctggaggggacgcaggacgacgac
agcgccgtcgggccggccgagggccagaacccggctacggctcccgcactcccggtaccg
cacacgcggcggctgctgatcgtcgaggagcgcgtgcgcgggctgctctccgtggtcgcc
gagagtgccgtcgccgatctggaccacagccgcgccgcgcgggatcagcatgacgccgtg
gagatcgtcaccgccatggacgcccaggaggcggcctccgccctggccgccgggccgtgc
cactgcgtcgtcctcagcatggatctgcccgacggcgaggggccgcggctgctcgaggcc
gtggacggtgacaccgcgctggccaccgttccggtcctcgtccacaacaaccaccgtccg
agcgcggctcaggaggccgccctgcaggcccgggcggacaaccgccccctggaggttctg
tcgagcctggacgagctgaaggaacggatcaccctgcacctgtcggccgagcaacccggg
gacgtggtgccgctcgtgcggatggaggagaacctgggcacggcgccggtggtcgacatc
accctggcgggacacacggtgctcgtcgtcgacgacgacgcccgcaacctgttcgccctc
agcggcatcctcgaactgcacggcttgcgtgtactgcacgcggagaacggccgcaagagc
atcgacatcctcaccgcgcaccctgagatccgtctcgtgctgatggacgtgatgatgccg
gagatggacgggtacgccgcgaccgccgagatcaggaagatgccggagtaccggggcctg
ccgatcgtcgcggtcaccgccaaggccatgccgggagaccgggagaagagcctggcggcc
ggcgccagtgactacgtgacgaagcccgtcgacgcgaacgacctcatcgcctgcgtgcgg
cactggctgtccgcgtga
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