Streptomyces violaceus: RI060_03020
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Entry
RI060_03020 CDS
T09385
Name
(GenBank) type III PLP-dependent enzyme
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
sjn
Streptomyces violaceus
Pathway
sjn00300
Lysine biosynthesis
sjn00470
D-Amino acid metabolism
sjn01100
Metabolic pathways
sjn01110
Biosynthesis of secondary metabolites
sjn01120
Microbial metabolism in diverse environments
sjn01230
Biosynthesis of amino acids
Module
sjn_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
sjn00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
RI060_03020
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
RI060_03020
Enzymes [BR:
sjn01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
RI060_03020
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Gene cluster
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Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
WND16386
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Position
616527..617732
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AA seq
401 aa
AA seq
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MTRPTPAVRERVLSLPSPELPAYLYDLAALRTHATEIRAALPTRVELYYAAKANPEPEIL
AALEPCVDGYEVASGGELAHVAKAVPGRPLAFGGPGKTPDEVTAALELGVERFHVESEHE
LRVLAELARRVAPRRRVAVLPRVNLPVPDGSLAGGSLAMGGRPTPFGMDPARAEPVIRAL
ADGTYPQLELRGVHAHLASGLGADALLGVAGSVVGWATGLGVPVAEVNVGGGMSVDYADP
ERRFDWAAYGEGLARLTEARPGLTLRIEPGRALTAYCGWYATEVLDVKHSHGEEFAVVRG
GTHHLRTPATKGHDQPCSVLPVDTWPHPWPRPAAKSGLVTLAGQLCTPKDVLARRVPVPE
LRAGDRVVFSLAGAYAWNISHHDFLMHPRPGFHFLDDDTQA
NT seq
1206 nt
NT seq
+upstream
nt +downstream
nt
atgacccgcccgacccccgctgtacgcgagcgtgttctgtccctgccctccccggaactc
cccgcctacctctacgacttggcggccctgcgcacccacgccaccgagatccgggccgcg
cttcccacgcgagtcgagctgtactacgcggccaaggccaacccggagccggagatcctg
gccgcgctggagccctgtgtcgacggatacgaggtcgcgtcgggcggtgaactcgcgcat
gtcgccaaggcggtgccgggccggccgctggccttcggcgggcccggcaagacgccggac
gaggtgacggcggcactggagctcggcgtcgagcgcttccacgtcgagagcgagcacgag
ctgcgcgtgctggccgagctggcccgccgcgtggcgccccggcggcgtgtcgcggtgctg
ccccgcgtcaacctgccggtgcccgacggctcgctcgccgggggctcgctggcgatgggc
gggcggccgacacccttcggcatggaccccgcccgggccgagcccgtgatccgggcgctc
gccgacgggacgtacccgcagctcgaactgcggggtgtgcacgcccacttggcgagcgga
ctcggagcggacgcgctgctgggggtcgccgggagcgtggtcggctgggccacgggactc
ggtgtgccggtcgcggaggtgaacgtcgggggcggcatgagcgtcgactacgccgacccg
gagcgccgcttcgactgggccgcgtacggcgaggggctggcccggctcaccgaggcccgt
ccggggctgacgctgcggatcgagccggggcgggcgctcaccgcgtactgcggctggtac
gccacggaggtgctggacgtgaagcacagccacggcgaggagttcgccgtcgtccggggc
ggcacgcaccatctgcgcaccccggcgacgaagggacacgaccagccctgctcggtcctg
ccggtggacacctggccgcacccctggccccgaccggcggcgaagagcgggctcgtcacg
ctagcggggcagctgtgcacgccgaaggacgtgctggcccgccgggtacccgttccggaa
ctcagggccggggaccgggtggtgttctccctggcgggcgcctacgcctggaacatctcg
catcacgacttcctgatgcatcccaggcccgggttccacttcctggacgacgacacccag
gcttga
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