Streptomyces violaceus: RI060_05235
Help
Entry
RI060_05235 CDS
T09385
Name
(GenBank) ABC transporter ATP-binding protein
KO
K14698
ATP-binding cassette, subfamily B, bacterial IrtA/YbtP [EC:7.-.-.-]
Organism
sjn
Streptomyces violaceus
Pathway
sjn02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
sjn00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
RI060_05235
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sjn02000
]
RI060_05235
Transporters [BR:
sjn02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
RI060_05235
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
SMC_N
AAA_16
AAA_22
AAA_29
AAA_21
AAA_30
AAA_23
AAA_15
RsgA_GTPase
AAA_25
nSTAND1
AAA_33
AAA_24
Motif
Other DBs
NCBI-ProteinID:
WND16798
LinkDB
All DBs
Position
1158507..1160309
Genome browser
AA seq
600 aa
AA seq
DB search
MTSPPDADSTVGRNMAGLLRPYYLRFAAVVTLQVIGALAGLMPLLAVVELGRTLLAPGPI
GHGHVWFVVIAGAVGLFLRLLFTAASSGIGHILDGQVQLTFRRQLAAQLGRVPIGWFSRR
GTGELAKVVGEDVSAVHPFIAHTPGELVSAFVVPLVSLIYLFTIDWRLTLITLIPVVLAV
ALVPLMMTPARLREQEEFDAGMGRIASSVVEFVQGISVVKAFGGSERVHRRFLTAVDDFV
GSFFRMVRGLAGIAAGMQVALSPPFVLLVVLIGGTVLITAGDMAAADLLPFLLLGLGLTA
PVAALGHGFDDMQAARRAIGRIRDVLEVRPLPEPTHPATPQGHRVELRDVRFGYEAGHEV
LRGIDLVLEPGTVTAIVGPSGSGKSTLVQLLPRFFDPTHGSVALGGVDLRELGSRELYRK
VSFVFQDVRLLRASVADNIALAVPHADFDDVVRAARLAHIHDRILRLPRGYESVIGEDAG
LSGGEAQRISLARALLADAPVLVLDEATAFADPQTEQAVRRALATLEGTRTILVIAHRLE
TIAEADTVVMLDNGSIVERGNPAELLARNGRFAAFWQARRSAIADRTEAHSGVQRGGEPR
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atgacatcaccacccgacgccgattccacggtgggacggaacatggcggggctgctgcgc
ccctattacttacgcttcgctgccgtggtgacccttcaggtcataggcgccctcgcgggt
ctgatgccgctgctggcagtcgtcgaactggggcgcactctgctggcgcccggcccgatc
ggtcacggtcatgtctggttcgtcgtgatcgcgggtgcggtcggcttgttcctccgactg
ctgttcacggccgcgtcgtcgggaatcgggcacatcctcgacggtcaggtgcaactgacg
ttccgccggcaactggccgcgcagctggggcgcgtaccgatcggctggttctcccggcgc
gggaccggcgagctggcaaaggtggtgggcgaggacgtcagcgccgtgcacccgttcatc
gcccacacccccggcgagctcgtctccgccttcgtggtaccgctggtgtcgctgatctac
ctgttcaccatcgactggcggctcacactgatcacgctgataccggtcgtgctggcagtg
gcgctggtccccctgatgatgaccccggcccggctgcgtgagcaggaggagttcgatgcc
ggcatggggcggatcgcgagttcggtcgtcgagttcgtccagggcatctcggtggtcaag
gcgttcggtggaagtgagcgcgtccaccgtaggttcctcacggccgtggacgatttcgtc
ggcagcttcttccggatggtgcgcgggctcgccgggatcgccgccgggatgcaggtggcg
ctgtcgccgcccttcgtgctgctggtcgtgctgatcggcgggacggttctcatcaccgcc
ggtgacatggccgcggccgatctgctgcccttcctgctgctcggattgggcctgaccgct
cccgtggcggccctgggccacggcttcgacgacatgcaggccgcccggcgcgcgatcggc
cggatccgggacgtgctcgaggtgcggccgctgcccgagcccacgcacccggccacgccc
caggggcaccgcgtggagttgcgtgacgtccgattcggctacgaagccggtcacgaggtg
ctgcgcgggatcgacctggtgctcgaaccggggacggtcaccgcgatcgtcggaccgtcg
ggaagcgggaagtccacgctggtgcagctgttgccgcggttcttcgacccgacccacggt
tcggtcgccctcggcggtgtcgatctgcgcgagctcggcagccgggagctctaccggaag
gtctccttcgtcttccaggacgtccggctgctgcgcgcgtcggtcgcggacaacatcgcg
ctggcagtaccgcacgccgacttcgacgacgtggtgcgcgccgcccggctggcgcacatt
cacgatcggattctcaggttgccccgcggatacgagtcggtgatcggcgaggacgccggg
ctgtcgggtggcgaggcacagcggatctccctcgcacgcgcactgctcgccgacgcgccg
gttctcgtgctcgacgaggcgaccgccttcgccgacccgcaaaccgaacaggcggtgcgc
cgcgcactggcgacgctggagggcacccggacgatcctggtcatcgcccaccgcctggag
acgatcgctgaggccgacaccgtcgtgatgctggacaacgggtcgatcgtcgagcgcggc
aaccccgccgaactgctggcacggaacggaaggttcgccgcgttctggcaagcccgacgg
tctgcgatcgccgaccggaccgaagcccacagtggcgtacagcgaggaggtgagccccga
tga
DBGET
integrated database retrieval system
