Streptomyces janthinus: RI060_08925
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Entry
RI060_08925 CDS
T09385
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
KO
K00382
dihydrolipoyl dehydrogenase [EC:
1.8.1.4
]
Organism
sjn
Streptomyces janthinus
Pathway
sjn00010
Glycolysis / Gluconeogenesis
sjn00020
Citrate cycle (TCA cycle)
sjn00260
Glycine, serine and threonine metabolism
sjn00280
Valine, leucine and isoleucine degradation
sjn00310
Lysine degradation
sjn00380
Tryptophan metabolism
sjn00620
Pyruvate metabolism
sjn00630
Glyoxylate and dicarboxylate metabolism
sjn00640
Propanoate metabolism
sjn00670
One carbon pool by folate
sjn00785
Lipoic acid metabolism
sjn01100
Metabolic pathways
sjn01110
Biosynthesis of secondary metabolites
sjn01120
Microbial metabolism in diverse environments
sjn01200
Carbon metabolism
sjn01210
2-Oxocarboxylic acid metabolism
sjn01240
Biosynthesis of cofactors
Module
sjn_M00009
Citrate cycle (TCA cycle, Krebs cycle)
sjn_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
sjn_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
sjn_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
sjn00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
RI060_08925 (lpdA)
00020 Citrate cycle (TCA cycle)
RI060_08925 (lpdA)
00620 Pyruvate metabolism
RI060_08925 (lpdA)
00630 Glyoxylate and dicarboxylate metabolism
RI060_08925 (lpdA)
00640 Propanoate metabolism
RI060_08925 (lpdA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
RI060_08925 (lpdA)
00280 Valine, leucine and isoleucine degradation
RI060_08925 (lpdA)
00310 Lysine degradation
RI060_08925 (lpdA)
00380 Tryptophan metabolism
RI060_08925 (lpdA)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
RI060_08925 (lpdA)
00670 One carbon pool by folate
RI060_08925 (lpdA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sjn04147
]
RI060_08925 (lpdA)
Enzymes [BR:
sjn01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.1 With NAD+ or NADP+ as acceptor
1.8.1.4 dihydrolipoyl dehydrogenase
RI060_08925 (lpdA)
Exosome [BR:
sjn04147
]
Exosomal proteins
Exosomal proteins of breast cancer cells
RI060_08925 (lpdA)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyr_redox_2
Pyr_redox_dim
Pyr_redox
Pyr_redox_3
GIDA
FAD_oxidored
AlaDh_PNT_C
DAO
HI0933_like
FAD_binding_2
FAD_binding_3
NAD_binding_8
3HCDH_N
Lys_Orn_oxgnase
Thi4
Trp_halogenase
Lycopene_cycl
Motif
Other DBs
NCBI-ProteinID:
WND17457
LinkDB
All DBs
Position
1979407..1980843
Genome browser
AA seq
478 aa
AA seq
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MNSSDVNSSDVIVIGGGTGGYSTALRAAALGLDVVLVERDKVGGTCLHRGCIPSKAMLHA
AELVDGIAEARERWGVKATLDAVDWPALVATRDDIVARNHRGVEAHLAHAGVRVVRGSAR
LTGPRSVRVEGDGTDQGAQDFTARRGLVLATGSRPRTLPGLEPDGRRVVTSDDALFAPGL
PASVLVLGGGAIGVEYASFHRSLGAEVTLVEAADRIVPLEDADVSRHLTRGLKKRGIDVR
AGARLLDAEVLDGGVRARVRTARGETVTIGAERLLVAVGRAPVTDGLDVAAAGLTTDERG
FVVPADWDRLETAVPGVHVVGDLLPPPSLGLAHASFAEGLLVAETLAGVPSLPVDYAAVP
RVTYSSPQTAAVGLSEAEARARGHEVEANSMPLTAVAKGMVHGQGGMVKVVTEAGGGRVL
GVHLVGPHVSEMIAESQLVVGWDAEPSDVARHVHPHPTLSEAVGEVFLTLAGRGLHQQ
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atgaactcatcggacgtcaactcatcggacgtcatcgtcatcggcggcggcaccggcggt
tacagcaccgccctgcgcgccgccgccctcggtctcgacgtcgtgctcgtcgagcgggac
aaggtcggcgggacgtgtctgcaccgcggctgcatcccgagcaaggcgatgctgcacgcg
gccgaactcgtcgacggcatcgccgaggcacgcgagcgctggggtgtgaaggcgaccctg
gacgccgtcgactggccggcgctggtggccacgcgggacgacatcgtggcccgcaaccac
cggggggtggaggctcatctcgcgcacgcgggcgtgcgggtggtgaggggcagcgcccgg
ctgacggggccgcgttcggtgcgggtcgagggcgatggcacggaccagggcgcgcaggac
ttcaccgcccgccgcggcctcgtgctcgcgaccggctcacgcccgcgcacgctcccgggg
ctcgagccggacggccggcgtgtggtgacgagcgacgacgccctcttcgcgcccgggctc
ccggcgtccgtgctggtgctcgggggcggcgcgatcggcgtggagtacgcctcgttccac
cgttccctgggcgcggaggtcaccctggtcgaggccgccgaccggatcgtcccgctggag
gacgccgacgtgagccgtcatctgacccgcggtctgaagaagcgcggcatcgacgtccgg
gccggcgccaggctcctggacgccgaggtcctcgacggcggcgtacgcgcacgcgtgcgc
accgcccggggcgagaccgtcacgatcggggccgagcggctgctggtcgcggtcgggcgg
gccccggtcaccgacggcctggacgtggccgccgcgggcctcaccacggacgagcggggt
ttcgtcgtgccggccgactgggaccggctggagacggccgtgcccggcgtccacgtcgtg
ggcgacctgctgccgccgccgtcgctcggactggcccacgcgtccttcgcggaagggctg
ctggtggccgagacgctggccggtgtgccgtccctgcccgtggactacgcggccgtgccc
cgcgtcacgtactcgtcgccgcagaccgcggccgtggggctgagcgaggccgaggcacgc
gcgcgtgggcacgaggtggaggccaacagcatgccgctgaccgccgtcgcgaagggcatg
gtgcacgggcagggcggcatggtgaaggtcgtcacggaggccggcggcgggcgcgtgctg
ggcgtgcacctggtgggcccgcacgtgtcggagatgatcgccgagagtcagctggtcgtc
ggctgggatgccgagccgtccgacgtggcccggcacgtccacccgcacccgaccctgtcg
gaggcggtcggcgaggtgttcctgaccctggccggacgcggcctccaccagcagtga
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