Streptomyces janthinus: RI060_09420
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Entry
RI060_09420 CDS
T09385
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
sjn
Streptomyces janthinus
Brite
KEGG Orthology (KO) [BR:
sjn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sjn03016
]
RI060_09420
Enzymes [BR:
sjn01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
RI060_09420
Transfer RNA biogenesis [BR:
sjn03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
RI060_09420
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GFIT
Motif
Pfam:
DNA_pol_A_exo1
DNA_pol_A_exoN
HRDC
Motif
Other DBs
NCBI-ProteinID:
WND17549
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All DBs
Position
2086740..2088029
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AA seq
429 aa
AA seq
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MTDAHDTAADSSLRTTGGAPPDDGGSSATEAPIPLLEPREGIPPVIADETALARMIAAFE
AGTGPVAVDAERASGYRYGQRAYLVQLRREGAGSALIDPVACPDLSSLGEALSGVEWVLH
AATQDLPCLREIGMVPTRLFDTELAGRLAGFPRVGLGAMVEGVLGFVLEKGHSAVDWSTR
PLPEPWLRYAALDVELLVDLRDALEKELDRQGKLEWARQEFDAIASAPPPEPRKDPWRRT
SGMHKVRRRRQLAVVRELWQTRDRIAQRRDVSPGKVLGDAAIVEAALALPANVHALAALN
GFGHRTGKRQLEQWQTAVDRAKALTEAQLPQPGQPVAGPPPPRAWADKDPVAAARLSAAR
AGVSALAEQINMPQENLITPDTVRRVCWEPPKVVDAESVEAALAGYGARPWQVELVTPVL
VEALSAKEA
NT seq
1290 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgacgcccacgacaccgcagcagacagctcactgcgaaccaccggaggcgcccct
ccggacgacggcggatcttctgctacggaggcgccgatccccttgctggaaccgcgcgag
ggcattccgcccgtgatcgcggacgagaccgccctggcccggatgatcgccgccttcgag
gcgggtaccggccccgtcgccgtcgatgccgagcgggcgtccggctaccgctacggccag
cgtgcctacctggtgcagctgcgccgcgagggcgccggctcggctctgatcgatcctgtg
gcctgccccgacctctcctccctgggcgaggccctctccggcgtcgagtgggtgctgcac
gccgccacccaggacctgccctgcctgcgcgagataggcatggtgccgacacggctgttc
gacaccgagctggccgggcggctcgccgggttcccccgggtcggcctcggcgcgatggtc
gagggcgtgctcggtttcgtcctggagaagggacactccgcggtcgactggtccacccgg
ccgctgcccgagccctggctgcggtacgcggcactggacgtcgagctgctcgtcgacctg
cgcgacgcgctggagaaggagctggaccggcagggcaagctggagtgggcccgccaggag
ttcgacgcgatcgcctcggccccgccgcccgagccccgcaaggatccctggcggcgtacg
tccggcatgcacaaggtgcgccggcggcggcagctggccgtcgtacgggagctgtggcag
acccgggaccggatcgcgcagcgccgggacgtctcacccggcaaggtgctcggggacgcg
gccatcgtggaggccgcgctggcacttccggccaacgtgcacgcgctcgccgcgctgaac
ggcttcggacaccggacgggcaagcggcagctggagcagtggcagactgccgtggatcgg
gcgaaggcgctgaccgaggcgcagttgccgcagccggggcagccggttgcggggccgccg
ccgccgcgggcctgggccgacaaggatccggttgccgcggctcggttgtccgcggcgcgg
gcgggggtttcggcgctggccgagcagatcaacatgccgcaggagaatctgatcacgccg
gacacggtgaggcgggtttgctgggagccgcccaaggtggtggacgccgagtctgtggag
gcggcgcttgccgggtacggtgcgcggccttggcaggtcgagctggtgactccggtgctg
gtggaggcgctgtccgccaaggaggcctag
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