Streptomyces violaceus: RI060_09760
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Entry
RI060_09760 CDS
T09385
Name
(GenBank) Y4yA family PLP-dependent enzyme
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
sjn
Streptomyces violaceus
Pathway
sjn00300
Lysine biosynthesis
sjn00470
D-Amino acid metabolism
sjn01100
Metabolic pathways
sjn01110
Biosynthesis of secondary metabolites
sjn01120
Microbial metabolism in diverse environments
sjn01230
Biosynthesis of amino acids
Module
sjn_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
sjn00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
RI060_09760
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
RI060_09760
Enzymes [BR:
sjn01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
RI060_09760
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Ala_racemase_N
Orn_DAP_Arg_deC
Motif
Other DBs
NCBI-ProteinID:
WND17610
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All DBs
Position
2171547..2173013
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AA seq
488 aa
AA seq
DB search
MDGRPLYLEPRLEPRLRSLVAATGTLHSLTDALGSPLHLVVPDQIAENLERFRSVYRAHH
LSGQVFYAHKANRSSALLRRLAATDAGVDVASLGELQHALGAGFTADRITATGPKNPEFL
WLAARAGVTVGVDGVAELDQLAALVRGHALAPVRVLLRLSGFETSGVRVLSRRSRFGTPV
RELELLLKAVERHGDAVDLTGVSFHLDTTSVAEKATALEGCLAALEACRSRGLRPRAVDI
GGGFGVSYLAEREQWEAYTTALTSAVLGRRPPLTWGGHGYGLRNESGTLRGTLGLYPAHR
SVAGPAYLDELLAQPAASLGGRPLAGLLLEHLYDLHTEPGRALLDQCGLTLAKVLEVREQ
EAGGELLVRLAAKADDIALEDHGVLMDPVVIPRSGAGPGERPVAVHLFGSLCLETDLITR
RTVFLPRRPVPGDLLAFANTAGYAMDFHATRAQHQPAARKVAAFQDGDVWRWCLDDQFWP
IMPSGGAQ
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atggacggccggcccttgtatctcgaaccgcggctggagccacggctgaggtcgctcgtg
gcggcgaccgggacattgcactcgctcaccgacgcgctcggttcaccactgcacctcgtg
gtgccggaccagatcgccgagaacctggagcggttccggtccgtgtaccgcgcgcaccat
ctgtccggccaggtcttctacgcccacaaggccaaccggtccagcgctctgctgcgccgc
ctcgcggccacggacgcgggcgtggacgtcgcgtcgctgggcgagttacagcacgcgctc
ggtgccggattcaccgccgaccggatcaccgccaccgggcccaagaaccccgagttcctg
tggctcgcggcccgtgcgggagtcacggtcggcgtcgacggcgtggccgagctggaccag
ctcgccgcgctggtgcgggggcacgcgctcgccccggtgcgggtgctgctgcggctgtcg
gggttcgagacgtcgggggtgagagtgctcagccggcgcagccggttcggcacgcccgta
cgggagttggagctgctgctgaaggcggtcgagcggcacggcgacgcggtggacctcacc
ggggtgtccttccacctggacacgacgagcgtcgcggagaaggcgaccgcgctcgaaggg
tgtctggcggccctggaggcgtgccggagccggggactgcggccccgggccgtggacatc
ggcggcgggttcggcgtcagctacctcgccgagcgggagcagtgggaggcgtacacgacg
gcgctcacgtccgccgtcctgggccgccgtccgcccctgacgtggggcgggcacggctac
ggactgcggaacgagtccggcaccctgcgcggcacgctcggcctctaccccgcccaccgg
tccgtcgccggcccggcctacctggacgagctgctggcccagcccgcggcctccctgggc
ggccgtccgctggccggactgctgctggagcacctgtacgacctgcacaccgagcccggc
cgggccctgctggaccagtgcgggctgacgctggcgaaggtgctggaggtccgcgagcag
gaggccggcggggaactgctcgtacggctggccgcgaaggcggacgacatcgccctggag
gaccacggagtgctgatggacccggtcgtcatccccagaagcggggccgggccgggcgag
aggcccgtcgccgtccacctcttcggcagcctctgcctggagaccgacctgatcaccagg
cgcacggtgttcctgccccgccgtccggtccccggcgacctgctggcgttcgccaacacc
gccgggtacgccatggacttccacgccacccgcgcccagcaccagcccgccgcccgcaag
gtcgccgccttccaggacggcgacgtgtggcgctggtgcctcgacgaccagttctggccg
atcatgccctcggggggagcccagtga
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