Streptomyces janthinus: RI060_10415
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Entry
RI060_10415 CDS
T09385
Name
(GenBank) DNA topoisomerase IV subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
sjn
Streptomyces janthinus
Brite
KEGG Orthology (KO) [BR:
sjn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sjn03032
]
RI060_10415
03400 DNA repair and recombination proteins [BR:
sjn03400
]
RI060_10415
Enzymes [BR:
sjn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
RI060_10415
DNA replication proteins [BR:
sjn03032
]
Prokaryotic type
DNA Topoisomerases
RI060_10415
DNA repair and recombination proteins [BR:
sjn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
RI060_10415
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
FliT
Mei5
Motif
Other DBs
NCBI-ProteinID:
WND17731
LinkDB
All DBs
Position
2318502..2320958
Genome browser
AA seq
818 aa
AA seq
DB search
MARRSTKTPPPDDSYEERILDIDVVDEMQGSFLEYAYSVIYSRALPDARDGLKPVHRRIV
YQMSEMGLRPERGYVKCARVVGEVMGKLHPHGDASIYDALVRMAQPFSMRVPLVDGHGNF
GSLGNDDPPAAMRYTECRMAEATSLMTDSIDEDTVDFNPNYDGQEQEPVALPAAFPNLLV
NGASGIAVGMATNMPPHNLREVIAAARHLIRYPNADLDALMKHVPGPDLPTGGRIVGLPG
IRDAYETGRGTFKMRATVAVETVTARRKGLVVTQLPFTVGPEKVIAKIKDLVGSKKLQGI
ADVKDLTDRAHGLRLVIEIKNGFVPEAVLEQLYKLTPMEESFGINNVALVDGQPLTLGLK
ELLEVYLDHRFTVVRRRSEFRRGKKRDRLHLVEGLLTALLDIDEVIRLIRSSENSAQAKQ
RLMEQFSLSEVQTQYILDTPLRRLTKFDRIELEAEKDRLNAEIEELTRILDSDAELRKLV
SSELASVAKKFGTDRRTDLLEAGGTPVATVPLQVADDPCRVLLSSTGLLARTANGEPFAE
DAGAERMKHDVIVSAVPATARGEVGAVTSAGRLLRLSVIDLPQLPESMSTPNLAGGAPLA
EFVSLEDDETLVCLTTLDESSPGLAIGTAQGVVKRVVPDYPSHKEELEVITLKEGDRIVG
AVELRTGDEDLIFISDDAQLLRYPAAQVRAQGRAAGGMAGIKLTEGAKVISFTAVDPAAD
AVVFTVAGSRGTLDDSVQTTAKLTPFDQYPRKGRATGGVRCQRFLKGEDCLSLAWAGPTP
ALAAQKNGTPVDLPEIDPRRDGSGVSLAKTVWVVAGPV
NT seq
2457 nt
NT seq
+upstream
nt +downstream
nt
atggcccgccgcagcacgaagaccccgccgcccgacgactcgtacgaggagaggatcctc
gacatcgacgtcgtcgacgagatgcagggctccttcctcgagtacgcgtactcggtcatc
tactcccgcgccctgccggacgcacgcgacggcctcaagccggtgcaccgccgcatcgtc
taccagatgagcgagatgggcctgcgccccgagcgcgggtacgtcaagtgcgcccgcgtc
gttggcgaggtgatgggcaagctgcacccgcacggcgacgcgtcgatctacgacgccctc
gtgcgcatggcccagcccttctcgatgcgcgtccccctggtagacggccacggcaacttc
ggctcgctgggcaacgacgacccgccggccgcaatgcggtacaccgagtgccggatggcc
gaggcgacgagcctgatgacggattccatcgacgaggacaccgtcgacttcaatcccaac
tacgacggccaggagcaggagccggtggccctgcccgccgccttcccgaacctcctggtc
aacggcgcctcgggcatcgcggtcggtatggccacgaacatgccgccgcacaacctgcgc
gaggtcatcgcggccgcccgccacctgatcaggtacccgaacgcggacctcgacgccctg
atgaagcacgtcccgggccccgacctgcccaccggcggccgcatcgtcggcctgcccggc
atccgggacgcgtacgagacgggccgcggcacgttcaagatgcgggcgaccgtcgccgtg
gagaccgtgacggcccgccgcaagggcctcgtcgtcacccagctgcccttcacggtcggt
ccggagaaggtgatcgccaagatcaaggacctggtcggctcgaagaagctccagggcatc
gccgacgtcaaggacctcaccgaccgcgcgcacggcctgcgcctggtcatcgagatcaag
aacggcttcgtcccggaggcggtcctggagcagctgtacaagctgacgccgatggaggag
tccttcggcatcaacaacgtggccctggtcgacggccagccgctcacgctgggtctcaag
gagctcctggaggtctacctcgaccaccgcttcaccgtcgtacggcggcgttcggagttc
cgccgcggcaagaagcgcgaccggctgcacctggtcgagggtctgctgacggccctgctg
gacatcgacgaggtcatccgcctcatccgctccagcgagaactccgcgcaggcgaagcag
cgcctgatggagcagttctcgctgagcgaggtgcagacgcagtacatcctcgacacgccg
ctgcgccgcctgaccaagttcgaccgcatcgagctggaagcggagaaggaccggctcaac
gcggagatcgaggaactgacccggatcctcgattcggacgccgagctgcgcaagctggtc
tcctccgaactggcctccgtcgccaagaagttcggcaccgaccggcgtacggacctgctg
gaggcgggcggcaccccggtcgcgaccgtgccgctccaggtggccgacgacccgtgccgg
gtgctgctgtcctcgacgggtctgctggcccgtacggcgaacggcgagccgttcgcggag
gacgccggcgccgagcgaatgaagcacgacgtgatcgtctcggcggtgccggccaccgcc
cgtggcgaggtgggcgcggtcacctcggcgggccggctgctgcggctgagcgtgatcgac
ctgccccagctcccggagtcgatgtcgacgccgaacctcgcggggggcgccccgctggcg
gagttcgtctccctggaggacgacgagacgctggtctgcctgacgaccctcgacgagtcg
tcgccgggcctggcgatcggcacggcacagggtgtcgtcaagcgcgtggtgccggactat
ccgtcccacaaggaagagctcgaggtgatcaccctcaaggagggcgaccgcatcgtcggc
gcggtggaactgcgtaccggcgacgaggatctgatcttcatctccgacgacgcccagctg
ctgcgctacccggccgcacaggtccgcgcccagggccgcgcggcgggcggcatggcgggc
atcaagctcacggagggcgcgaaggtcatctccttcacggcggtggatccggcagcggac
gccgtcgtcttcaccgtcgcgggctcgcgcggcaccctggacgactccgtccagacgacg
gccaagctgaccccgttcgatcaatacccgcgcaagggccgcgccacgggcggcgtccgc
tgccagcggttcctgaagggcgaggactgcctgtccctggcctgggcgggcccgaccccg
gccctcgccgcgcagaagaacggcactccggtcgacctcccggagatcgacccgcggcgg
gacggctcgggggtgtccctggccaagaccgtgtgggtggtcgcggggccggtctag
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