Streptomyces janthinus: RI060_10640
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Entry
RI060_10640 CDS
T09385
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
sjn
Streptomyces janthinus
Pathway
sjn00300
Lysine biosynthesis
sjn00470
D-Amino acid metabolism
sjn01100
Metabolic pathways
sjn01110
Biosynthesis of secondary metabolites
sjn01120
Microbial metabolism in diverse environments
sjn01230
Biosynthesis of amino acids
Module
sjn_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
sjn00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
RI060_10640 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
RI060_10640 (dapF)
Enzymes [BR:
sjn01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
RI060_10640 (dapF)
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GFIT
Motif
Pfam:
DAP_epimerase
Motif
Other DBs
NCBI-ProteinID:
WND17773
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Position
complement(2381043..2381921)
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AA seq
292 aa
AA seq
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MSTRARIAFLKGHGTENDFVIVPDPENTIDLPPAAVAALCDRRAGIGGDGLLHVVRSAAH
PEARHMAAEAEWFMDYRNGDGSIAEMCGNGVRVFARYLQRAGHVTEGDIAVATRGGVKAV
HIAKDGDVTVGMGRALLPEGDVTVSVGERTWPARNVNMGNPHAVAFVDDLSHAGDLLSSP
PFSPAAAYPDGVNVEFVIDRGPRHVALRVHERGAGETRSCGTGACAVAVATARRDGADPA
VTGVPATYTVDVPGGTLVITERPDGEIEMTGPAVIVAEGEIDSVWLESATGV
NT seq
879 nt
NT seq
+upstream
nt +downstream
nt
atgagcacgcgcgcgcggatcgccttcctcaagggccacggcaccgagaacgacttcgtg
atcgtcccggaccccgagaacaccatcgacctgcccccggccgccgtcgccgccctgtgc
gaccgccgcgcgggcatcggcggtgacggactgctgcacgtcgtgcggtccgccgcgcac
cccgaggcccggcacatggcggccgaggcggagtggttcatggactaccgcaacggcgac
ggctccatcgcggagatgtgcggcaacggcgtgcgggtgttcgcgcgctacctccagcgc
gccgggcatgtgaccgaaggggacatcgccgtcgccacgcgcgggggcgtgaaggccgtg
cacatcgccaaggacggtgacgtcaccgtgggcatgggcagggcgctgctccccgagggc
gacgtcacggtgagcgtcggtgagcgcacctggcccgcgcggaacgtcaacatgggcaac
ccgcacgcggtcgccttcgtggacgacctgtcccacgcgggtgacctgctctcctcaccg
ccgttcagcccggccgccgcctacccggacggtgtgaacgtcgagttcgtgatcgaccgc
ggcccccggcatgtcgcgctgcgcgtgcacgagcgcggcgccggcgagacccgctcctgc
ggcacgggcgcgtgcgcggtcgccgtggccaccgcccggcgcgacggtgccgatccggcg
gtcaccggcgttccggcgacgtacaccgtggacgtccccggcggcaccctggtgatcacc
gagcggcccgacggcgagatcgagatgaccggcccggccgtgatcgtggccgagggcgag
atcgactcggtctggctggaatccgccaccggggtgtga
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