Streptomyces violaceus: RI060_11545
Help
Entry
RI060_11545 CDS
T09385
Symbol
ffh
Name
(GenBank) signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
sjn
Streptomyces violaceus
Pathway
sjn02024
Quorum sensing
sjn03060
Protein export
sjn03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
sjn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
RI060_11545 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
RI060_11545 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
RI060_11545 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
sjn02044
]
RI060_11545 (ffh)
Enzymes [BR:
sjn01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
RI060_11545 (ffh)
Secretion system [BR:
sjn02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
RI060_11545 (ffh)
Eukaryotic Sec-SRP protein
RI060_11545 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
CbiA
AAA_22
nSTAND3
Zeta_toxin
cobW
APS_kinase
ArsA_ATPase
AAA_31
MMR_HSR1
AAA_18
NPHP3_N
MobB
MeaB
AAA_30
Mei5
AAA_33
TsaE
Thymidylate_kin
AAA_16
AAA
ATP_bind_1
DUF1512_C
Motif
Other DBs
NCBI-ProteinID:
WND17935
LinkDB
All DBs
Position
complement(2592967..2594517)
Genome browser
AA seq
516 aa
AA seq
DB search
MFDTLSDRLSATFKNLRGKGRLSEADIDATARDIRIALLEADVALPVVRTFIKNVKERAL
GAEVSKALNPAQQVLKIVNEELVTILGGETRRLRFAKQPPTVIMLAGLQGAGKTTLAGKL
GHWLKEQGHSPLLVACDLQRPNAVNQLSVVAQRAGVGIYAPEPGNGVGDPVKVAKDSIEH
AKSKVHDIVIVDTAGRLGIDQEMMQQAADIRDAVSPEEILFVVDAMIGQDAVNTAEAFRD
GVGFDGVVLSKLDGDARGGAALSIRQITGKPIMFASNGEKLDDFDAFHPDRMASRILDMG
DLLTLIEQAEKTFSQEEAEKMASKLASKKGQDFTLDDFLAQMEQVRKMGSISKLLGMLPG
MGQMKDQIQNLDERDVDRTAAIIKSMTPAERQEPTIINGSRRARIARGSGVDVSAVKNLV
ERFFEARKMMSRMAQGGGMPGMPGMPGMGGGPGRTKKKQKQAKGKQRSGNPMKRKQQEQE
AEARRAAAAEGGSAFGLPQQGAKDFELPDEFKKFMG
NT seq
1551 nt
NT seq
+upstream
nt +downstream
nt
gtgttcgatactctttccgatcgcctctcagcgaccttcaagaacctgcgcggcaagggg
cgtctcagcgaagcggacatcgacgccacggcccgggacatccggatcgcgctcctcgag
gcggacgtggcgctgccggtcgtccggacgttcatcaagaacgtcaaggagcgcgccctc
ggtgccgaggtcagcaaggcgctgaacccggcccagcaggtcctcaagatcgtcaacgag
gaactcgtcaccatcctcggcggcgagacccggcgcctgcgcttcgccaagcagccgccc
accgtgatcatgctggcgggtctgcagggtgcgggtaagaccaccctcgcgggcaagctc
ggccactggctgaaggagcagggccactcgccgctgctggtcgcctgtgacctccagcgc
ccgaacgccgtgaaccagctcagcgtcgtcgcccagcgcgcgggcgtcggcatctacgcg
ccggagccgggtaacggcgtcggcgacccggtcaaggtggccaaggactccatcgagcac
gccaagtccaaggtccacgacatcgtgatcgtggacaccgccggccgcctcggcatcgac
caggagatgatgcagcaggccgctgacatcagggacgcggtcagccccgaggagatcctg
ttcgtcgtcgacgcgatgatcggccaggacgcggtcaacaccgccgaggccttccgcgac
ggtgtcggcttcgacggcgtggtgctctccaagctcgacggtgacgcccgcggtggtgcg
gccctgtcgatccggcagatcaccggcaagccgatcatgttcgcgtcgaacggcgagaag
ctcgacgacttcgacgccttccaccctgaccggatggcctcccgcatcctcgacatgggt
gacctgctcaccctgatcgagcaggcggagaagacgttcagtcaggaagaggccgagaaa
atggcctccaagctggcgtccaagaagggccaggacttcaccctggacgacttcctggcc
cagatggagcaggtcaggaagatgggctccatctccaagctgctcggcatgctcccgggc
atgggccagatgaaggaccagatccagaacctcgacgagcgggacgtcgaccgtacggcc
gccatcatcaagtcgatgaccccggccgagcgccaggagccgacgatcatcaatggctcg
cgccgcgcccgtatcgcgcgtggttcgggtgtcgacgtcagcgcggtgaagaacctggtc
gagcggttcttcgaggcccgcaagatgatgtcccgcatggcccagggcggcggcatgccc
gggatgcccggcatgccgggcatgggcggcggtcccggccggacgaagaagaagcagaag
caggccaagggcaagcagcgctccggcaacccgatgaagcgcaagcagcaggagcaggag
gccgaggcccgtcgcgccgcggccgccgagggcggcagcgccttcgggctgccgcagcag
ggcgccaaggacttcgaactccccgatgagttcaagaagttcatgggctga
DBGET
integrated database retrieval system
