Streptomyces violaceus: RI060_11620
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Entry
RI060_11620 CDS
T09385
Symbol
mutM
Name
(GenBank) bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
sjn
Streptomyces violaceus
Pathway
sjn03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sjn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
RI060_11620 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sjn03400
]
RI060_11620 (mutM)
Enzymes [BR:
sjn01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
RI060_11620 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
RI060_11620 (mutM)
DNA repair and recombination proteins [BR:
sjn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
RI060_11620 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
DUF7573
zf-FPG_IleRS
Auto_anti-p27
Zn_ribbon_recom
NFACT_N
DZR
Motif
Other DBs
NCBI-ProteinID:
WND17950
LinkDB
All DBs
Position
complement(2612638..2613498)
Genome browser
AA seq
286 aa
AA seq
DB search
MPELPEVEVVRRGLERWVVHRTVAEVEVLHPRAVRRHLAGGDDFADRLKGHRIGTPSRRG
KYLWLPLEDTDQSILAHLGMSGQLLVQPHAAPDEKHLRIRARFTDALDTELRFVDQRTFG
GLSLHDNTPEGLPDVIAHIARDPLDPLFDEEAFHRALRRKRSTIKRALLDQSLISGVGNI
YADEALWRARIHYERPTATFTRPRTLSLLGHVRDVMNSALAVGGTSFDSLYVNVNGESGY
FDRSLDAYGREGLPCRRCGTPMRRRPWMNRSSYYCPKCQRPPRITP
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
atgcccgagttgcccgaggtcgaggtcgtccggcgcggcctggagcggtgggtcgtccac
cggacggtagccgaggtcgaggtgctgcacccgcgcgcggtgcgccgccacctcgcgggc
ggcgacgacttcgcggaccgtctgaagggccatcgcatcggtacgcccagccgccggggc
aagtacctgtggctgccgctggaggacacggaccagtcgatcctggcccacctcggcatg
agcggccagctgctggtgcagccgcacgcggctcccgacgagaagcacctgcgcatccgc
gcccgcttcaccgacgccctggacaccgaactccgcttcgtcgaccagcgcaccttcggc
ggtctttcgctgcacgacaacacccccgagggcctgcccgacgtcatcgcgcacatcgcc
cgcgacccgctcgacccgctcttcgacgaagaggccttccaccgggcgctgcgccgcaag
cggtccacgatcaaacgggccctgctcgaccagtcgctgatcagcggcgtcggcaacatc
tacgcggacgaggcgctgtggcgcgcccgcatccactacgagcgcccgaccgcgaccttc
acacgtccgcgcacgctgtcgctgctgggccatgtgcgggacgtgatgaactccgccctc
gccgtgggcggcaccagcttcgacagcctgtacgtcaacgtcaacggcgagtcgggctac
ttcgaccggtccctcgacgcgtacggccgcgagggcctgccctgccggcgctgtggcacg
ccgatgcgccggcggccctggatgaaccggtcgagctactactgcccgaagtgccagcga
ccgccgcggatcacgccctag
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