Streptomyces violaceus: RI060_11725
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Entry
RI060_11725 CDS
T09385
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
sjn
Streptomyces violaceus
Brite
KEGG Orthology (KO) [BR:
sjn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sjn03032
]
RI060_11725
03036 Chromosome and associated proteins [BR:
sjn03036
]
RI060_11725
03400 DNA repair and recombination proteins [BR:
sjn03400
]
RI060_11725
DNA replication proteins [BR:
sjn03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
RI060_11725
Chromosome and associated proteins [BR:
sjn03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
RI060_11725
DNA repair and recombination proteins [BR:
sjn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
RI060_11725
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HC2
Extensin_1
Motif
Other DBs
NCBI-ProteinID:
WND17967
UniProt:
A0ABY9U6P1
LinkDB
All DBs
Position
complement(2634026..2634670)
Genome browser
AA seq
214 aa
AA seq
DB search
MNKAQLVEAIADKMGGRQQAADAVDHVLDAIVRAVVTGERVSVTGFGSFEKVDRPARYAR
NPQTGERVRVKKTSVPRFRAGQGFKDLVSGSKKLPRGGEVSVKKAPKGSLTGGAGATVKK
AAAKKATTAKKAAAKKATAKTTTAKKATTKTAAAKKTTAKKAPAKKTTATAKSTAAKKTT
AKKAPAKKATAKKAPAKKSTARKTTAKKTTARKK
NT seq
645 nt
NT seq
+upstream
nt +downstream
nt
gtgaacaaggcgcagctcgtagaagcgattgccgacaagatgggcggccgtcagcaggcc
gccgatgctgtcgaccacgtactggacgccatcgtccgcgcggtcgtcacgggtgagcgg
gtctcggtcaccggcttcggttcgttcgagaaggtcgaccgtccggcgcgctacgctcgt
aacccccagacgggcgagcgggttcgggtcaagaagacctccgttccgcgcttccgcgcg
ggtcagggcttcaaggacctggtcagcggctcgaagaagctgccgcgtggtggcgaggtc
tcggtcaagaaggcgcccaagggcagcctgaccggcggtgccggcgcgacggtcaagaag
gccgcggcgaagaaggcgacgaccgcgaagaaggccgccgcgaagaaggccaccgccaag
acgacgacggcgaagaaggcgaccacgaagacggcggccgcgaagaagacgacggcgaag
aaggcgcccgccaagaagaccacggcgaccgccaagagcaccgccgcgaagaagaccacc
gccaagaaggccccggcgaagaaggccacggccaagaaggcgcccgccaagaagtcgacg
gcgcgcaagaccaccgccaagaagaccaccgctcgcaagaagtaa
DBGET
integrated database retrieval system
